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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100787841   putative pentatricopeptide repeat-containing protein At3g49142 
 mtr-u.5   11411029   putative pentatricopeptide repeat-containing protein At3g49142 
 ath-u.5   AT3G49142   Tetratricopeptide repeat (TPR)-like superfamily protein 
 bra-r.6   103875111   putative pentatricopeptide repeat-containing protein At3g49142 
 vvi-u.5   100248393   putative pentatricopeptide repeat-containing protein At3g49142 
 ghi-r.1   107930163   putative pentatricopeptide repeat-containing protein At3g49142 
 ghi-r.1   107890756   putative pentatricopeptide repeat-containing protein At3g49142 
 cit-r.1   102617539   putative pentatricopeptide repeat-containing protein At3g49142 
 sly-u.5   101263284   putative pentatricopeptide repeat-containing protein At3g49142 
 sot-r.1   102578419   putative pentatricopeptide repeat-containing protein At3g49142 
 nta-r.1   107821977   putative pentatricopeptide repeat-containing protein At3g49142 
 nta-r.1   107803449   putative pentatricopeptide repeat-containing protein At3g49142 
 osa-u.5   4332214   putative pentatricopeptide repeat-containing protein At3g49142 
 zma-u.5   100194323   Putative pentatricopeptide repeat-containing protein 
 sbi-r.1   110436867   putative pentatricopeptide repeat-containing protein At3g49142 

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Top 50 coexpressed genes to 100787841 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100787841 (gma-u.5 coexpression data)

CoexMap""


ppoLOC18098494 | Entrez gene ID : 18098494    
Species gma mtr ath bra vvi ghi cit sly sot nta osa zma sbi tae bdi hvu cre bna ppo
Paralog 1 1 1 1 1 2 1 1 1 2 1 1 1 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
Function putative pentatricopeptide repeat-containing protein At3g49142
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (384 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (777 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1480 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_024457019.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  chlo 2,  cyto_mito 2,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_024457019.1)
Subcellular
localization
TargetP
mito 5,  chlo 3  (predict for XP_024457019.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100787841
mtr-u.5
for
11411029
ath-u.5
for
AT3G49142
bra-r.6
for
103875111
vvi-u.5
for
100248393
ghi-r.1
for
107930163
ghi-r.1
for
107890756
cit-r.1
for
102617539
sly-u.5
for
101263284
sot-r.1
for
102578419
nta-r.1
for
107821977
nta-r.1
for
107803449
osa-u.5
for
4332214
zma-u.5
for
100194323
sbi-r.1
for
110436867

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Ortholog ID: 11158
Species gma mtr ath bra vvi ghi ghi cit sly sot nta nta osa zma sbi
Symbol LOC100787841 LOC11411029 AT3G49142 LOC103875111 LOC100248393 LOC107930163 LOC107890756 LOC102617539 LOC101263284 LOC102578419 LOC107821977 LOC107803449 LOC4332214 LOC100194323 LOC110436867
Function* putative pentatricopeptide repeat-containing protein At3g49142 putative pentatricopeptide repeat-containing protein At3g49142 Tetratricopeptide repeat (TPR)-like superfamily protein putative pentatricopeptide repeat-containing protein At3g49142 putative pentatricopeptide repeat-containing protein At3g49142 putative pentatricopeptide repeat-containing protein At3g49142 putative pentatricopeptide repeat-containing protein At3g49142 putative pentatricopeptide repeat-containing protein At3g49142 putative pentatricopeptide repeat-containing protein At3g49142 putative pentatricopeptide repeat-containing protein At3g49142 putative pentatricopeptide repeat-containing protein At3g49142 putative pentatricopeptide repeat-containing protein At3g49142 putative pentatricopeptide repeat-containing protein At3g49142 Putative pentatricopeptide repeat-containing protein putative pentatricopeptide repeat-containing protein At3g49142
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100787841 11411029 10723034 103875111 100248393 107930163 107890756 102617539 101263284 102578419 107821977 107803449 4332214 100194323 110436867
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