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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   18104831   F-box protein GID2 
 ppo-r.4   18104831   F-box protein GID2 
 ppo-u.5   7462857   F-box protein GID2 
 gma-u.5   100802513   F-box protein GID2 
 gma-u.5   100801734   F-box protein GID2 
 gma-u.5   100794333   F-box protein GID2 
 mtr-u.5   25489913   F-box protein GID2 
 ath-u.5   SLY1   F-box family protein 
 vvi-u.5   100266007   F-box protein GID2 
 vvi-u.5   100245654   F-box protein GID2 
 sly-u.5   GID2   F-box protein GID2 
 zma-u.5   100283034   F-box protein GID2 
 zma-u.5   103653681   F-box protein GID2 

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Top 50 coexpressed genes to 18104831 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 18104831 (ppo-u.5 coexpression data)

CoexMap"18104831"


ppoLOC18104831 | Entrez gene ID : 18104831    
Species ppo gma mtr ath vvi sly zma bdi hvu bra cit bna sbi ghi osa sot nta cre tae
Paralog 3 3 1 1 2 1 2 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop04075 [list] [network] Plant hormone signal transduction (517 genes)
GO BP
GO:0009740 [list] [network] gibberellic acid mediated signaling pathway  (15 genes)  IEA  
GO:0009937 [list] [network] regulation of gibberellic acid mediated signaling pathway  (18 genes)  IEA  
GO CC
GO:0019005 [list] [network] SCF ubiquitin ligase complex  (65 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_006374868.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  mito 1,  plas 1,  extr 1,  mito_plas 1  (predict for XP_006374868.1)
Subcellular
localization
TargetP
other 9  (predict for XP_006374868.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
18104831
ppo-r.4
for
18104831
ppo-u.5
for
7462857
gma-u.5
for
100802513
gma-u.5
for
100801734
gma-u.5
for
100794333
mtr-u.5
for
25489913
ath-u.5
for
SLY1
vvi-u.5
for
100266007
vvi-u.5
for
100245654
sly-u.5
for
GID2
zma-u.5
for
100283034
zma-u.5
for
103653681


Ortholog ID: 5808
Species ppo ppo gma gma mtr ath bra vvi vvi ghi ghi bna bna cit sly sot nta nta zma zma tae hvu sbi bdi
Symbol LOC7462857 LOC18104831 LOC100801734 LOC100802513 LOC25489913 SLY1 LOC103861839 LOC100266007 LOC100245654 LOC121217887 LOC121230292 LOC106441806 LOC106376023 LOC127902651 GID2 LOC102580736 LOC107763036 LOC107778447 LOC103653681 LOC100283034 LOC123060026 LOC123442620 LOC8055404 LOC100841148
Function* F-box protein GID2 F-box protein GID2 F-box protein GID2 F-box protein GID2 F-box protein GID2 F-box family protein F-box protein GID2 F-box protein GID2 F-box protein GID2 F-box protein GID2 F-box protein GID2 F-box protein GID2 F-box protein GID2-like F-box protein GID2 F-box protein GID2 uncharacterized LOC102580736 F-box protein GID2-like F-box protein GID2 F-box protein GID2 F-box protein GID2 F-box protein GID2 F-box protein GID2-like F-box protein GID2 F-box protein GID2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 2
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 5
bna04382 Cornified envelope formation 5
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 5
bna04382 Cornified envelope formation 5
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00592 alpha-Linolenic acid metabolism 2
nta04075 Plant hormone signal transduction 2
nta03040 Spliceosome 2
nta00750 Vitamin B6 metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 5
zma04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00020 Citrate cycle (TCA cycle) 2
bdi00785 Lipoic acid metabolism 2
bdi01200 Carbon metabolism 2
bdi01210 2-Oxocarboxylic acid metabolism 2
bdi04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7462857 18104831 100801734 100802513 25489913 828522 103861839 100266007 100245654 121217887 121230292 106441806 106376023 127902651 101243703 102580736 107763036 107778447 103653681 100283034 123060026 123442620 8055404 100841148
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