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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8055404   F-box protein GID2 
 zma-u.5   100283034   F-box protein GID2 
 zma-u.5   103653681   F-box protein GID2 
 tae-r.2   123068514   F-box protein GID2 
 tae-r.2   123060026   F-box protein GID2 
 hvu-r.1   123442620   F-box protein GID2-like 
 bdi-r.1   100841148   F-box protein GID2 
 ath-u.5   SLY1   F-box family protein 
 gma-u.5   100802513   F-box protein GID2 
 gma-u.5   100801734   F-box protein GID2 
 gma-u.5   100794333   F-box protein GID2 
 sly-u.5   GID2   F-box protein GID2 
 bra-r.6   103861839   F-box protein GID2 
 vvi-u.5   100245654   F-box protein GID2 
 vvi-u.5   100266007   F-box protein GID2 
 ppo-u.5   7462857   F-box protein GID2 
 ppo-u.5   18104831   F-box protein GID2 
 mtr-u.5   25489913   F-box protein GID2 
 ghi-r.1   107930621   F-box protein GID2 
 ghi-r.1   121217887   F-box protein GID2 
 ghi-r.1   121229026   F-box protein GID2 
 bna-r.1   106441806   F-box protein GID2 
 bna-r.1   106376023   F-box protein GID2-like 
 sot-r.1   102580736   uncharacterized LOC102580736 
 cit-r.1   127902651   F-box protein GID2 
 nta-r.1   107778447   F-box protein GID2 
 nta-r.1   107763036   F-box protein GID2-like 

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Top 50 coexpressed genes to 8055404 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8055404 (sbi-r.1 coexpression data)

CoexMap"8055404"


sbiLOC8055404 | Entrez gene ID : 8055404    
Species sbi zma tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre osa
Paralog 1 2 2 1 1 1 3 1 1 2 2 1 3 2 1 1 2 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi04075 [list] [network] Plant hormone signal transduction (389 genes)
GO BP
GO:0009740 [list] [network] gibberellic acid mediated signaling pathway  (5 genes)  IEA  
GO:0031146 [list] [network] SCF-dependent proteasomal ubiquitin-dependent protein catabolic process  (59 genes)  IEA  
GO CC
GO:0019005 [list] [network] SCF ubiquitin ligase complex  (52 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_021316206.1 [sequence] [blastp]
XP_021316207.1 [sequence] [blastp]
XP_021316208.1 [sequence] [blastp]
XP_021316209.1 [sequence] [blastp]
XP_021316210.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  chlo 4,  cyto_nucl 3  (predict for XP_021316206.1)
nucl 5,  chlo 4,  cyto_nucl 3  (predict for XP_021316207.1)
nucl 5,  chlo 4,  cyto_nucl 3  (predict for XP_021316208.1)
nucl 6,  chlo 1,  cyto 1,  mito 1,  plas 1,  mito_plas 1,  cyto_plas 1  (predict for XP_021316209.1)
nucl 6,  chlo 1,  cyto 1,  mito 1,  plas 1,  mito_plas 1,  cyto_plas 1  (predict for XP_021316210.1)
Subcellular
localization
TargetP
chlo 3  (predict for XP_021316206.1)
chlo 3  (predict for XP_021316207.1)
chlo 3  (predict for XP_021316208.1)
chlo 6,  other 5  (predict for XP_021316209.1)
chlo 6,  other 5  (predict for XP_021316210.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8055404
zma-u.5
for
100283034
zma-u.5
for
103653681
tae-r.2
for
123068514
tae-r.2
for
123060026
hvu-r.1
for
123442620
bdi-r.1
for
100841148
ath-u.5
for
SLY1
gma-u.5
for
100802513
gma-u.5
for
100801734
gma-u.5
for
100794333
sly-u.5
for
GID2
bra-r.6
for
103861839
vvi-u.5
for
100245654
vvi-u.5
for
100266007
ppo-u.5
for
7462857
ppo-u.5
for
18104831
mtr-u.5
for
25489913
ghi-r.1
for
107930621
ghi-r.1
for
121217887
ghi-r.1
for
121229026
bna-r.1
for
106441806
bna-r.1
for
106376023
sot-r.1
for
102580736
cit-r.1
for
127902651
nta-r.1
for
107778447
nta-r.1
for
107763036


Ortholog ID: 5808
Species sbi zma zma tae hvu bdi ath gma gma gma sly bra vvi vvi ppo ppo mtr ghi ghi ghi bna bna sot cit nta nta
Symbol LOC8055404 LOC100283034 LOC103653681 LOC123060026 LOC123442620 LOC100841148 SLY1 LOC100802513 LOC100801734 LOC100794333 GID2 LOC103861839 LOC100245654 LOC100266007 LOC7462857 LOC18104831 LOC25489913 LOC121217887 LOC121229026 LOC121230292 LOC106441806 LOC106376023 LOC102580736 LOC127902651 LOC107778447 LOC107763036
Function* F-box protein GID2 F-box protein GID2 F-box protein GID2 F-box protein GID2 F-box protein GID2-like F-box protein GID2 F-box family protein F-box protein GID2 F-box protein GID2 F-box protein GID2 F-box protein GID2 F-box protein GID2 F-box protein GID2 F-box protein GID2 F-box protein GID2 F-box protein GID2 F-box protein GID2 F-box protein GID2 F-box protein GID2 F-box protein GID2 F-box protein GID2 F-box protein GID2-like uncharacterized LOC102580736 F-box protein GID2 F-box protein GID2 F-box protein GID2-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 5
zma04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00020 Citrate cycle (TCA cycle) 2
bdi00785 Lipoic acid metabolism 2
bdi01200 Carbon metabolism 2
bdi01210 2-Oxocarboxylic acid metabolism 2
bdi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
gma03008 Ribosome biogenesis in eukaryotes 2
gma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 2
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 5
bna04382 Cornified envelope formation 5
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 5
bna04382 Cornified envelope formation 5
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00592 alpha-Linolenic acid metabolism 2
nta04075 Plant hormone signal transduction 2
nta03040 Spliceosome 2
nta00750 Vitamin B6 metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 8055404 100283034 103653681 123060026 123442620 100841148 828522 100802513 100801734 100794333 101243703 103861839 100245654 100266007 7462857 18104831 25489913 121217887 121229026 121230292 106441806 106376023 102580736 127902651 107778447 107763036
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