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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   18105108   pentatricopeptide repeat-containing protein At1g09900 
 ppo-r.4   18105108   pentatricopeptide repeat-containing protein At1g09900 
 gma-u.5   100775884   pentatricopeptide repeat-containing protein At1g09900 
 mtr-u.5   25499013   pentatricopeptide repeat-containing protein At1g09900 
 vvi-u.5   100264976   pentatricopeptide repeat-containing protein At5g39710 
 sly-u.5   101245807   pentatricopeptide repeat-containing protein At1g63330-like 

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Top 50 coexpressed genes to 18105108 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 18105108 (ppo-u.5 coexpression data)

CoexMap"18105108"


ppoLOC18105108 | Entrez gene ID : 18105108    
Species ppo gma mtr vvi sly hvu zma bna cit bra ghi osa sbi bdi ath nta tae cre sot
Paralog 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_006375195.2 [sequence] [blastp]
XP_024440853.1 [sequence] [blastp]
XP_024440854.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  nucl 1,  cyto 1,  vacu 1,  E.R. 1,  chlo_mito 1,  cysk_nucl 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for XP_006375195.2)
chlo 3,  nucl 1,  cyto 1,  vacu 1,  E.R. 1,  chlo_mito 1,  cysk_nucl 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for XP_024440853.1)
chlo 3,  nucl 1,  cyto 1,  vacu 1,  E.R. 1,  chlo_mito 1,  cysk_nucl 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for XP_024440854.1)
Subcellular
localization
TargetP
other 6  (predict for XP_006375195.2)
other 6  (predict for XP_024440853.1)
other 6  (predict for XP_024440854.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
18105108
ppo-r.4
for
18105108
gma-u.5
for
100775884
mtr-u.5
for
25499013
vvi-u.5
for
100264976
sly-u.5
for
101245807


Ortholog ID: 14558
Species ppo gma mtr vvi ghi ghi cit sly sot nta nta
Symbol LOC18105108 LOC100775884 LOC25499013 LOC100264976 LOC107934137 LOC107942132 LOC102617004 LOC101245807 LOC102589246 LOC107821987 LOC107808237
Function* pentatricopeptide repeat-containing protein At1g09900 pentatricopeptide repeat-containing protein At1g09900 pentatricopeptide repeat-containing protein At1g09900 pentatricopeptide repeat-containing protein At5g39710 pentatricopeptide repeat-containing protein At5g01110 pentatricopeptide repeat-containing protein At5g01110 pentatricopeptide repeat-containing protein At1g63330-like pentatricopeptide repeat-containing protein At1g63330-like pentatricopeptide repeat-containing protein At1g12620-like uncharacterized LOC107821987 uncharacterized LOC107808237
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00310 Lysine degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 18105108 100775884 25499013 100264976 107934137 107942132 102617004 101245807 102589246 107821987 107808237
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