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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   18105242   UV-stimulated scaffold protein A homolog 
 ppo-r.4   18105242   UV-stimulated scaffold protein A homolog 
 ppo-u.5   7497253   UV-stimulated scaffold protein A homolog 
 gma-u.5   100817832   UV-stimulated scaffold protein A homolog 
 gma-u.5   100800426   UV-stimulated scaffold protein A homolog 
 mtr-u.5   25499736   UV-stimulated scaffold protein A homolog 
 ath-u.5   AT3G61800   ENTH/VHS protein 
 bra-r.6   103830328   UV-stimulated scaffold protein A homolog 
 vvi-u.5   100250210   UV-stimulated scaffold protein A homolog 
 ghi-r.1   107938164   UV-stimulated scaffold protein A homolog 
 ghi-r.1   107899922   UV-stimulated scaffold protein A homolog 
 bna-r.1   106433937   UV-stimulated scaffold protein A homolog 
 bna-r.1   106353294   UV-stimulated scaffold protein A homolog 
 cit-r.1   102624271   UV-stimulated scaffold protein A homolog 
 cit-r.1   127901204   UV-stimulated scaffold protein A homolog 
 sly-u.5   101254133   UV-stimulated scaffold protein A homolog 
 sot-r.1   102584783   UV-stimulated scaffold protein A homolog 
 nta-r.1   107820364   UV-stimulated scaffold protein A homolog 
 nta-r.1   107786949   UV-stimulated scaffold protein A homolog 
 osa-u.5   4329068   UV-stimulated scaffold protein A homolog 
 zma-u.5   100278704   uncharacterized LOC100278704 
 tae-r.2   123063339   UV-stimulated scaffold protein A homolog 
 tae-r.2   123063348   UV-stimulated scaffold protein A homolog 
 tae-r.2   123072321   UV-stimulated scaffold protein A homolog 
 hvu-r.1   123445403   UV-stimulated scaffold protein A homolog 
 sbi-r.1   8069050   UV-stimulated scaffold protein A homolog 
 bdi-r.1   100828500   UV-stimulated scaffold protein A homolog 

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Top 50 coexpressed genes to 18105242 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 18105242 (ppo-u.5 coexpression data)

CoexMap"18105242"


ppoLOC18105242 | Entrez gene ID : 18105242    
Species ppo gma mtr ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 2 1 1 1 1 2 2 2 1 1 2 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop03420 [list] [network] Nucleotide excision repair (89 genes)
GO BP
GO:0006283 [list] [network] transcription-coupled nucleotide-excision repair  (6 genes)  IEA  
GO:0009411 [list] [network] response to UV  (13 genes)  IEA  
GO CC
GO:0005694 [list] [network] chromosome  (396 genes)  IEA  
GO MF
GO:0000993 [list] [network] RNA polymerase II complex binding  (23 genes)  IEA  
Protein XP_006375367.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  cyto 3,  nucl 1,  plas 1,  nucl_plas 1,  cyto_pero 1,  cyto_E.R. 1  (predict for XP_006375367.2)
Subcellular
localization
TargetP
other 6,  scret 6  (predict for XP_006375367.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
18105242
ppo-r.4
for
18105242
ppo-u.5
for
7497253
gma-u.5
for
100817832
gma-u.5
for
100800426
mtr-u.5
for
25499736
ath-u.5
for
AT3G61800
bra-r.6
for
103830328
vvi-u.5
for
100250210
ghi-r.1
for
107938164
ghi-r.1
for
107899922
bna-r.1
for
106433937
bna-r.1
for
106353294
cit-r.1
for
102624271
cit-r.1
for
127901204
sly-u.5
for
101254133
sot-r.1
for
102584783
nta-r.1
for
107820364
nta-r.1
for
107786949
osa-u.5
for
4329068
zma-u.5
for
100278704
tae-r.2
for
123063339
tae-r.2
for
123063348
tae-r.2
for
123072321
hvu-r.1
for
123445403
sbi-r.1
for
8069050
bdi-r.1
for
100828500


Ortholog ID: 8068
Species ppo ppo gma gma mtr ath bra vvi ghi ghi bna bna cit cit sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC18105242 LOC7497253 LOC100817832 LOC100800426 LOC25499736 AT3G61800 LOC103830328 LOC100250210 LOC107938164 LOC107899922 LOC106433937 LOC106353294 LOC102624271 LOC127901204 LOC101254133 LOC102584783 LOC107820364 LOC107786949 LOC4329068 LOC100278704 LOC123063339 LOC123063348 LOC123072321 LOC123445403 LOC8069050 LOC100828500
Function* UV-stimulated scaffold protein A homolog UV-stimulated scaffold protein A homolog UV-stimulated scaffold protein A homolog UV-stimulated scaffold protein A homolog UV-stimulated scaffold protein A homolog ENTH/VHS protein UV-stimulated scaffold protein A homolog UV-stimulated scaffold protein A homolog UV-stimulated scaffold protein A homolog UV-stimulated scaffold protein A homolog UV-stimulated scaffold protein A homolog UV-stimulated scaffold protein A homolog UV-stimulated scaffold protein A homolog UV-stimulated scaffold protein A homolog UV-stimulated scaffold protein A homolog UV-stimulated scaffold protein A homolog UV-stimulated scaffold protein A homolog UV-stimulated scaffold protein A homolog UV-stimulated scaffold protein A homolog uncharacterized LOC100278704 UV-stimulated scaffold protein A homolog UV-stimulated scaffold protein A homolog UV-stimulated scaffold protein A homolog UV-stimulated scaffold protein A homolog UV-stimulated scaffold protein A homolog UV-stimulated scaffold protein A homolog
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma02010 ABC transporters 2
gma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma02010 ABC transporters 2
gma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03250 Viral life cycle - HIV-1 2
ghi03420 Nucleotide excision repair 2
ghi00310 Lysine degradation 2
ghi04075 Plant hormone signal transduction 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03250 Viral life cycle - HIV-1 2
ghi03420 Nucleotide excision repair 2
ghi00310 Lysine degradation 2
ghi04075 Plant hormone signal transduction 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 3
bna03420 Nucleotide excision repair 2
bna00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03420 Nucleotide excision repair 4
bna03040 Spliceosome 3
bna03022 Basal transcription factors 2
bna00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 4
nta04626 Plant-pathogen interaction 4
nta04016 MAPK signaling pathway - plant 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 4
nta04626 Plant-pathogen interaction 4
nta04016 MAPK signaling pathway - plant 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
osa03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03420 Nucleotide excision repair 4
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03420 Nucleotide excision repair 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 18105242 7497253 100817832 100800426 25499736 825353 103830328 100250210 107938164 107899922 106433937 106353294 102624271 127901204 101254133 102584783 107820364 107786949 4329068 100278704 123063339 123063348 123072321 123445403 8069050 100828500
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