Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7497253   UV-stimulated scaffold protein A homolog 
 ppo-r.4   7497253   UV-stimulated scaffold protein A homolog 
 ppo-m.4   7497253   UV-stimulated scaffold protein A homolog 
 ppo-u.5   18105242   UV-stimulated scaffold protein A homolog 
 gma-u.5   100817832   UV-stimulated scaffold protein A homolog 
 gma-u.5   100800426   UV-stimulated scaffold protein A homolog 
 mtr-u.5   25499736   UV-stimulated scaffold protein A homolog 
 ath-u.5   AT3G61800   ENTH/VHS protein 
 vvi-u.5   100250210   UV-stimulated scaffold protein A homolog 
 sly-u.5   101254133   UV-stimulated scaffold protein A homolog 
 osa-u.5   4329068   UV-stimulated scaffold protein A homolog 
 zma-u.5   100278704   uncharacterized LOC100278704 

close


Top 50 coexpressed genes to 7497253 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 7497253 (ppo-u.5 coexpression data)

CoexMap"7497253"


ppoLOC7497253 | Entrez gene ID : 7497253    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop03420 [list] [network] Nucleotide excision repair (89 genes)
GO BP
GO:0006283 [list] [network] transcription-coupled nucleotide-excision repair  (6 genes)  IEA  
GO:0009411 [list] [network] response to UV  (13 genes)  IEA  
GO CC
GO:0005694 [list] [network] chromosome  (396 genes)  IEA  
GO MF
GO:0000993 [list] [network] RNA polymerase II complex binding  (23 genes)  IEA  
Protein XP_002302633.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  cyto_nucl 4,  nucl 2,  mito 1,  chlo 1,  plas 1,  cysk 1,  cyto_mito 1,  cysk_plas 1  (predict for XP_002302633.1)
Subcellular
localization
TargetP
other 9,  mito 3  (predict for XP_002302633.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7497253

.
ppo-r.4
for
7497253

.
ppo-m.4
for
7497253

.
ppo-u.5
for
18105242

.
gma-u.5
for
100817832

.
gma-u.5
for
100800426

.
mtr-u.5
for
25499736

.
ath-u.5
for
AT3G61800

.
vvi-u.5
for
100250210

.
sly-u.5
for
101254133

.
osa-u.5
for
4329068

.
zma-u.5
for
100278704

.


Ortholog ID: 8068
Species ath gma gma sly osa zma bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit cit bdi nta nta
Symbol AT3G61800 LOC100817832 LOC100800426 LOC101254133 LOC4329068 LOC100278704 LOC103830328 LOC100250210 LOC7497253 LOC18105242 LOC25499736 LOC123063339 LOC123063348 LOC123445403 LOC107899922 LOC107938164 LOC106353294 LOC106433937 LOC8069050 LOC102584783 LOC102624271 LOC127901204 LOC100828500 LOC107820364 LOC107786949
Function* ENTH/VHS protein UV-stimulated scaffold protein A homolog UV-stimulated scaffold protein A homolog UV-stimulated scaffold protein A homolog UV-stimulated scaffold protein A homolog uncharacterized LOC100278704 UV-stimulated scaffold protein A homolog UV-stimulated scaffold protein A homolog UV-stimulated scaffold protein A homolog UV-stimulated scaffold protein A homolog UV-stimulated scaffold protein A homolog UV-stimulated scaffold protein A homolog UV-stimulated scaffold protein A homolog UV-stimulated scaffold protein A homolog UV-stimulated scaffold protein A homolog UV-stimulated scaffold protein A homolog UV-stimulated scaffold protein A homolog UV-stimulated scaffold protein A homolog UV-stimulated scaffold protein A homolog UV-stimulated scaffold protein A homolog UV-stimulated scaffold protein A homolog UV-stimulated scaffold protein A homolog UV-stimulated scaffold protein A homolog UV-stimulated scaffold protein A homolog UV-stimulated scaffold protein A homolog
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma02010 ABC transporters 2
gma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma02010 ABC transporters 2
gma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
osa03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03420 Nucleotide excision repair 4
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03420 Nucleotide excision repair 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03250 Viral life cycle - HIV-1 2
ghi03420 Nucleotide excision repair 2
ghi00310 Lysine degradation 2
ghi04075 Plant hormone signal transduction 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03250 Viral life cycle - HIV-1 2
ghi03420 Nucleotide excision repair 2
ghi00310 Lysine degradation 2
ghi04075 Plant hormone signal transduction 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03420 Nucleotide excision repair 4
bna03040 Spliceosome 3
bna03022 Basal transcription factors 2
bna00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 3
bna03420 Nucleotide excision repair 2
bna00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 4
nta04626 Plant-pathogen interaction 4
nta04016 MAPK signaling pathway - plant 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 4
nta04626 Plant-pathogen interaction 4
nta04016 MAPK signaling pathway - plant 2
nta03420 Nucleotide excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 825353 100817832 100800426 101254133 4329068 100278704 103830328 100250210 7497253 18105242 25499736 123063339 123063348 123445403 107899922 107938164 106353294 106433937 8069050 102584783 102624271 127901204 100828500 107820364 107786949
The preparation time of this page was 0.1 [sec].