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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   18106044   uncharacterized LOC18106044 
 ppo-r.4   18106044   uncharacterized LOC18106044 
 ppo-u.5   7458496   uncharacterized LOC7458496 
 gma-u.5   100804281   uncharacterized LOC100804281 
 gma-u.5   100788173   uncharacterized LOC100788173 
 gma-u.5   100801960   uncharacterized LOC100801960 
 mtr-u.5   11423714   uncharacterized LOC11423714 
 ath-u.5   AT4G22360   SWIB complex BAF60b domain-containing protein 
 vvi-u.5   100853436   uncharacterized LOC100853436 
 vvi-u.5   100264067   uncharacterized LOC100264067 
 sly-u.5   101256830   uncharacterized LOC101256830 
 osa-u.5   4337317   uncharacterized LOC4337317 
 osa-u.5   4345963   uncharacterized LOC4345963 
 zma-u.5   103645800   SWIB complex BAF60b domain-containing protein 
 zma-u.5   103654486   formin-like protein 5 
 zma-u.5   100193333   uncharacterized LOC100193333 

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Top 50 coexpressed genes to 18106044 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 18106044 (ppo-u.5 coexpression data)

CoexMap"18106044"


ppoLOC18106044 | Entrez gene ID : 18106044    
Species ppo gma mtr ath vvi sly osa zma tae hvu ghi bdi cit bra cre sbi bna nta sot
Paralog 3 3 1 1 2 1 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (3662 genes)  IEA  
GO MF
Protein XP_006373623.3 [sequence] [blastp]
XP_024443874.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cysk 1,  cyto 1,  plas 1,  extr 1,  E.R._vacu 1,  cyto_plas 1  (predict for XP_006373623.3)
nucl 6,  cysk 1,  cyto 1,  plas 1,  extr 1,  E.R._vacu 1,  cyto_plas 1  (predict for XP_024443874.2)
Subcellular
localization
TargetP
other 8  (predict for XP_006373623.3)
other 8  (predict for XP_024443874.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
18106044

.
ppo-r.4
for
18106044

.
ppo-u.5
for
7458496

.
gma-u.5
for
100804281

.
gma-u.5
for
100788173

.
gma-u.5
for
100801960

.
mtr-u.5
for
11423714

.
ath-u.5
for
AT4G22360

.
vvi-u.5
for
100853436

.
vvi-u.5
for
100264067

.
sly-u.5
for
101256830

.
osa-u.5
for
4337317

.
osa-u.5
for
4345963

.
zma-u.5
for
103645800

.
zma-u.5
for
103654486

.
zma-u.5
for
100193333

.


Ortholog ID: 3962
Species ath gma gma sly osa osa zma zma bra bra vvi vvi ppo ppo mtr tae tae hvu hvu ghi ghi bna bna sbi sbi sot cit bdi bdi nta nta
Symbol AT4G22360 LOC100801960 LOC100804281 LOC101256830 LOC4345963 LOC4337317 LOC100193333 LOC103654486 LOC103860027 LOC103861307 LOC100264067 LOC100853436 LOC18106044 LOC7458496 LOC11423714 LOC123046934 LOC123166280 LOC123427995 LOC123409589 LOC107925273 LOC107930434 LOC125578304 BNAA08G10220D LOC8064043 LOC8082561 LOC102595561 LOC102627106 LOC100842878 LOC100831700 LOC107824166 LOC107795796
Function* SWIB complex BAF60b domain-containing protein uncharacterized LOC100801960 uncharacterized LOC100804281 uncharacterized LOC101256830 uncharacterized LOC4345963 uncharacterized LOC4337317 uncharacterized LOC100193333 formin-like protein 5 uncharacterized LOC103860027 uncharacterized LOC103861307 uncharacterized LOC100264067 uncharacterized LOC100853436 uncharacterized LOC18106044 uncharacterized LOC7458496 uncharacterized LOC11423714 formin-like protein 1 uncharacterized LOC123166280 formin-like uncharacterized LOC123409589 uncharacterized LOC107925273 uncharacterized LOC107930434 uncharacterized LOC125578304 transcription factor rlmA skin secretory protein xP2 uncharacterized LOC8082561 uncharacterized LOC102595561 alpha/beta-gliadin A-III mediator of RNA polymerase II transcription subunit 15 uncharacterized LOC100831700 uncharacterized LOC107824166 uncharacterized LOC107795796
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 7
gma04075 Plant hormone signal transduction 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 3
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 3
zma03015 mRNA surveillance pathway 2
zma03082 ATP-dependent chromatin remodeling 2
zma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 6
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
bra03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
vvi04120 Ubiquitin mediated proteolysis 2
vvi04075 Plant hormone signal transduction 2
vvi04081 Hormone signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
vvi04075 Plant hormone signal transduction 2
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 3
mtr04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 2
sot04016 MAPK signaling pathway - plant 2
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 4
bdi03040 Spliceosome 3
bdi00061 Fatty acid biosynthesis 2
bdi00062 Fatty acid elongation 2
bdi01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 4
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 2
nta03420 Nucleotide excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 828331 100801960 100804281 101256830 4345963 4337317 100193333 103654486 103860027 103861307 100264067 100853436 18106044 7458496 11423714 123046934 123166280 123427995 123409589 107925273 107930434 125578304 106360975 8064043 8082561 102595561 102627106 100842878 100831700 107824166 107795796
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