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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   18106275   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 10 
 ppo-r.4   18106275   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 10 
 ppo-u.5   18100171   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 10 
 ppo-u.5   7453730   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 11 
 gma-u.5   100820379   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 9 
 gma-u.5   100814418   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 12 
 gma-u.5   100814098   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 12 
 mtr-u.5   11418392   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 12 
 mtr-u.5   11429553   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 12 
 mtr-u.5   25495879   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 12 
 ath-u.5   AT3G02070   Cysteine proteinases superfamily protein 
 ath-u.5   AT3G22260   Cysteine proteinases superfamily protein 
 ath-u.5   AT5G04250   Cysteine proteinases superfamily protein 
 bra-r.6   103862740   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 12 
 bra-r.6   103869098   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 11 
 bra-r.6   103847315   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 9 
 vvi-u.5   100257696   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 11 
 vvi-u.5   100255072   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 12 
 vvi-u.5   100254784   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 9 
 ghi-r.1   107927115   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 12 
 ghi-r.1   107963899   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 12 
 ghi-r.1   107957361   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 9 
 bna-r.1   111198038   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 10 
 bna-r.1   125602346   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 11-like 
 bna-r.1   111204225   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 9 
 cit-r.1   102620085   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 11 
 cit-r.1   102609080   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 10 
 cit-r.1   102613419   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 12 
 sly-u.5   101252879   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 11-like 
 sly-u.5   101253373   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 9 
 sly-u.5   101253803   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 11-like 
 sot-r.1   102579685   OTU domain-containing protein DDB_G0284757-like 
 sot-r.1   102599183   OTU domain-containing protein DDB_G0284757 
 nta-r.1   107807095   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 11-like 
 nta-r.1   107811766   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 11 
 nta-r.1   107815727   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 12 
 osa-u.5   4341800   OTU domain-containing protein DDB_G0284757 
 osa-u.5   4334861   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 12 
 osa-u.5   4335733   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 12 
 zma-u.5   100279737   uncharacterized LOC100279737 
 zma-u.5   118472054   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 12-like 
 zma-u.5   100192862   Cysteine proteinases superfamily protein 
 tae-r.2   123129017   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 12 
 tae-r.2   123132437   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 11 
 tae-r.2   123123899   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 12 
 hvu-r.1   123452803   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 9-like 
 hvu-r.1   123426605   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 12 
 hvu-r.1   123407212   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 11-like 
 sbi-r.1   8056458   OTU domain-containing protein DDB_G0284757 
 sbi-r.1   8061372   uncharacterized LOC8061372 
 sbi-r.1   8083193   OTU domain-containing protein DDB_G0284757 
 bdi-r.1   100833552   OTU domain-containing protein DDB_G0284757 
 bdi-r.1   100841273   uncharacterized LOC100841273 
 bdi-r.1   100840439   OTU domain-containing protein DDB_G0284757 
 cre-r.1   CHLRE_12g541100v5   uncharacterized protein 

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Top 50 coexpressed genes to 18106275 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 18106275 (ppo-u.5 coexpression data)

CoexMap"18106275"


ppoLOC18106275 | Entrez gene ID : 18106275    
Species ppo gma mtr ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 3 3 3 3 3 3 3 3 2 3 3 3 3 3 3 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016579 [list] [network] protein deubiquitination  (97 genes)  IEA  
GO CC
GO MF
GO:0004843 [list] [network] cysteine-type deubiquitinase activity  (76 genes)  IEA  
Protein XP_006373945.1 [sequence] [blastp]
XP_024443553.1 [sequence] [blastp]
XP_024443554.1 [sequence] [blastp]
XP_024443555.1 [sequence] [blastp]
XP_024443558.1 [sequence] [blastp]
XP_024443559.1 [sequence] [blastp]
XP_052303947.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_006373945.1)
nucl 10  (predict for XP_024443553.1)
nucl 10  (predict for XP_024443554.1)
nucl 10  (predict for XP_024443555.1)
nucl 8,  chlo 1,  plas 1,  extr 1  (predict for XP_024443558.1)
nucl 8,  chlo 1,  plas 1,  extr 1  (predict for XP_024443559.1)
nucl 10  (predict for XP_052303947.1)
Subcellular
localization
TargetP
other 7  (predict for XP_006373945.1)
other 7  (predict for XP_024443553.1)
other 7  (predict for XP_024443554.1)
other 7  (predict for XP_024443555.1)
other 7  (predict for XP_024443558.1)
other 7  (predict for XP_024443559.1)
other 7  (predict for XP_052303947.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
18106275
ppo-r.4
for
18106275
ppo-u.5
for
18100171
ppo-u.5
for
7453730
gma-u.5
for
100820379
gma-u.5
for
100814418
gma-u.5
for
100814098
mtr-u.5
for
11418392
mtr-u.5
for
11429553
mtr-u.5
for
25495879
ath-u.5
for
AT3G02070
ath-u.5
for
AT3G22260
ath-u.5
for
AT5G04250
bra-r.6
for
103862740
bra-r.6
for
103869098
bra-r.6
for
103847315
vvi-u.5
for
100257696
vvi-u.5
for
100255072
vvi-u.5
for
100254784
ghi-r.1
for
107927115
ghi-r.1
for
107963899
ghi-r.1
for
107957361
bna-r.1
for
111198038
bna-r.1
for
125602346
bna-r.1
for
111204225
cit-r.1
for
102620085
cit-r.1
for
102609080
cit-r.1
for
102613419
sly-u.5
for
101252879
sly-u.5
for
101253373
sly-u.5
for
101253803
sot-r.1
for
102579685
sot-r.1
for
102599183
nta-r.1
for
107807095
nta-r.1
for
107811766
nta-r.1
for
107815727
osa-u.5
for
4341800
osa-u.5
for
4334861
osa-u.5
for
4335733
zma-u.5
for
100279737
zma-u.5
for
118472054
zma-u.5
for
100192862
tae-r.2
for
123129017
tae-r.2
for
123132437
tae-r.2
for
123123899
hvu-r.1
for
123452803
hvu-r.1
for
123426605
hvu-r.1
for
123407212
sbi-r.1
for
8056458
sbi-r.1
for
8061372
sbi-r.1
for
8083193
bdi-r.1
for
100833552
bdi-r.1
for
100841273
bdi-r.1
for
100840439
cre-r.1
for
CHLRE_12g541100v5


Ortholog ID: 396
Species ppo ppo ppo gma gma mtr mtr mtr ath ath ath bra bra bra vvi vvi vvi ghi ghi ghi bna bna bna cit cit cit sly sly sly sot sot sot nta nta nta osa osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi sbi bdi bdi bdi cre
Symbol LOC7453730 LOC7466285 LOC7479607 LOC100814098 LOC100811064 LOC11418392 LOC11429553 LOC25495879 AT3G22260 AT5G04250 AT5G03330 LOC103849869 LOC103855480 LOC103834681 LOC100255072 LOC100254784 LOC100243216 LOC107948555 LOC107904272 LOC107936011 LOC125602346 LOC125602344 LOC106428424 LOC102613419 LOC102627972 LOC102615448 LOC101252879 LOC101253803 LOC101267440 LOC102599183 LOC102579466 LOC102577725 LOC107815727 LOC107800114 LOC107804972 LOC4341800 LOC4334861 LOC4333353 LOC100192862 LOC100282393 LOC103641678 LOC123132437 LOC123136514 LOC123139894 LOC123426605 LOC123407212 LOC123401088 LOC8056458 LOC8076110 LOC8072060 LOC100833552 LOC100841273 LOC100835946 CHLRE_12g541100v5
Function* OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 11 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 12 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 11 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 12 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 9 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 12 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 12 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 12 Cysteine proteinases superfamily protein Cysteine proteinases superfamily protein Cysteine proteinases superfamily protein OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 12 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 10 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 11 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 12 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 9 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 12 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 11 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 9 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 9 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 11-like OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 11-like OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 9-like OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 12 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 9 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 12-like OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 11-like OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 11-like OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 12 OTU domain-containing protein DDB_G0284757 OTU domain-containing protein DDB_G0284757-like OTU domain-containing protein DDB_G0284757 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 12 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 12-like OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 12 OTU domain-containing protein DDB_G0284757 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 12 uncharacterized LOC4333353 Cysteine proteinases superfamily protein uncharacterized LOC100282393 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 12 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 11 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 11 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 12 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 12 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 11-like OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 12-like OTU domain-containing protein DDB_G0284757 OTU domain-containing protein DDB_G0284757 OTU domain-containing protein DDB_G0284757 OTU domain-containing protein DDB_G0284757 uncharacterized LOC100841273 OTU domain-containing protein 5-A uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 3
ppo00052 Galactose metabolism 2
ppo04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 2
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 5
mtr03250 Viral life cycle - HIV-1 2
mtr03272 Virion - Hepatitis viruses 2
mtr04145 Phagosome 2
mtr04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 2
ath04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00562 Inositol phosphate metabolism 2
ath04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 2
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03022 Basal transcription factors 2
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 4
ghi03420 Nucleotide excision repair 4
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 3
ghi04145 Phagosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03250 Viral life cycle - HIV-1 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00250 Alanine, aspartate and glutamate metabolism 2
cit00330 Arginine and proline metabolism 2
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot02010 ABC transporters 4
sot04075 Plant hormone signal transduction 3
sot04981 Folate transport and metabolism 2
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
nta04626 Plant-pathogen interaction 2
nta00562 Inositol phosphate metabolism 2
nta04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 2
zma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00940 Phenylpropanoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 3
tae04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
tae00904 Diterpenoid biosynthesis 3
tae00010 Glycolysis / Gluconeogenesis 2
tae00053 Ascorbate and aldarate metabolism 2
tae00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04016 MAPK signaling pathway - plant 2
hvu04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 3
hvu04075 Plant hormone signal transduction 2
hvu00030 Pentose phosphate pathway 2
hvu01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00920 Sulfur metabolism 2
sbi01320 Sulfur cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03250 Viral life cycle - HIV-1 2
sbi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7453730 7466285 7479607 100814098 100811064 11418392 11429553 25495879 821796 830304 831875 103849869 103855480 103834681 100255072 100254784 100243216 107948555 107904272 107936011 125602346 125602344 106428424 102613419 102627972 102615448 101252879 101253803 101267440 102599183 102579466 102577725 107815727 107800114 107804972 4341800 4334861 4333353 100192862 100282393 103641678 123132437 123136514 123139894 123426605 123407212 123401088 8056458 8076110 8072060 100833552 100841273 100835946 5719498
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