ATTED-II : GeneCoexpression result

Species	Gene	Description
ppo-u.5	18107421	40S ribosomal protein S8
ppo-r.4	18107421	40S ribosomal protein S8
ppo-u.5	7463832	40S ribosomal protein S8
ppo-u.5	18095365	40S ribosomal protein S8
ppo-u.5	7467347	40S ribosomal protein S8
gma-u.5	100500112	40S ribosomal protein S8
gma-u.5	100527664	40S ribosomal protein S8
gma-u.5	100794937	40S ribosomal protein S8
mtr-u.5	25498194	40S ribosomal protein S8
mtr-u.5	11417220	40S ribosomal protein S8
mtr-u.5	25500268	40S ribosomal protein S8
ath-u.5	AT5G20290	Ribosomal protein S8e family protein
ath-u.5	AT5G59240	Ribosomal protein S8e family protein
vvi-u.5	100854440	small ribosomal subunit protein eS8
vvi-u.5	100257147	small ribosomal subunit protein eS8
vvi-u.5	100257178	small ribosomal subunit protein eS8
sly-u.5	101267653	small ribosomal subunit protein eS8
sly-u.5	101250510	small ribosomal subunit protein eS8y
sly-u.5	101254603	small ribosomal subunit protein eS8
osa-u.5	4335547	small ribosomal subunit protein eS8-like
osa-u.5	4329381	40S ribosomal protein S8-like
zma-u.5	103654826	40S ribosomal protein S8-like
zma-u.5	103654828	40S ribosomal protein S8
zma-u.5	103654829	40S ribosomal protein S8-like

Annotation

functional annotation

KEGG

pop03010 [list] [network] Ribosome (698 genes)

GO BP

GO:0000462 [list] [network] maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	(43 genes)	IEA
GO:0006412 [list] [network] translation	(598 genes)	IEA

GO CC

GO:0022627 [list] [network] cytosolic small ribosomal subunit	(109 genes)	IEA
GO:0005840 [list] [network] ribosome	(453 genes)	IEA

GO MF

GO:0003735 [list] [network] structural constituent of ribosome

(439 genes)

IEA

Protein

XP_006373482.1 [sequence] [blastp]
XP_006373483.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 5, nucl 4, cyto 1, mito 1	(predict for XP_006373482.1)
chlo 5, nucl 4, cyto 1, mito 1	(predict for XP_006373483.1)

Subcellular
localization
TargetP

other 5, chlo 3	(predict for XP_006373482.1)
other 5, chlo 3	(predict for XP_006373483.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 18107421	ppo-r.4 for 18107421	ppo-u.5 for 7463832	ppo-u.5 for 18095365	ppo-u.5 for 7467347	gma-u.5 for 100500112	gma-u.5 for 100527664	gma-u.5 for 100794937	mtr-u.5 for 25498194	mtr-u.5 for 11417220	mtr-u.5 for 25500268	ath-u.5 for AT5G20290	ath-u.5 for AT5G59240	vvi-u.5 for 100854440	vvi-u.5 for 100257147	vvi-u.5 for 100257178	sly-u.5 for 101267653	sly-u.5 for 101250510	sly-u.5 for 101254603	osa-u.5 for 4335547	osa-u.5 for 4329381	zma-u.5 for 103654826	zma-u.5 for 103654828	zma-u.5 for 103654829

Ortholog

Ortholog ID: 1437

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

40S ribosomal protein S8

Ribosomal protein S8e family protein

40S ribosomal protein S8-1

small ribosomal subunit protein eS8

40S ribosomal protein S8

40S ribosomal protein S8-1

40S ribosomal protein S8-1-like

40S ribosomal protein S8-like

40S ribosomal protein S8

small ribosomal subunit protein eS8

uncharacterized LOC102577693

putative 40S ribosomal protein S8-like protein

small ribosomal subunit protein eS8

40S ribosomal protein S8-like

small ribosomal subunit protein eS8-like

40S ribosomal protein S8-like

ribosomal protein S8

40S ribosomal protein S8

ribosomal protein S8

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	5
ath03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	11
ghi03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	9
ghi03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	13

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	15

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	14

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	11
nta03015	mRNA surveillance pathway	2
nta03018	RNA degradation	2
nta00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	19
sbi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03010	Ribosome	21

Expression

Expression pattern

Entrez Gene ID^*

18095365

18107421

100527664

100794937

25498194

25500268

832151

836042

103856438

103845690

100257147

100257178

107917832

107920648

106386692

125596734

102626393

102615250

101264059

101267653

102577693

102577526

107820620

107760240

4329381

4335547

100193830

542341

123053083

123045250

123426468

8068608

8085785

100842054

100832177

5721805

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 18107421 (ppo-u.5 coexpression data)

Top 50 enrichment test to 18107421 (ppo-u.5 coexpression data)


Species	ppo	gma	mtr	ath	vvi	sly	osa	zma	hvu	bna	cit	bra	ghi	sbi	bdi	nta	tae	cre	sot
Paralog	5	3	3	2	3	3	2	3	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 18107421 (ppo-u.5 coexpression data)

Top 50 enrichment test to 18107421 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**