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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   18096998   growth-regulating factor 5 
 gma-u.5   GRF15   growth-regulating factor 
 gma-u.5   GRF13   growth-regulating factor 
 gma-u.5   GRF11   growth-regulating factor 
 mtr-u.5   25479294   growth-regulating factor 4 
 mtr-u.5   11429462   growth-regulating factor 5 
 mtr-u.5   25486490   growth-regulating factor 1 
 ath-u.5   GRF5   growth-regulating factor 5 
 vvi-u.5   100247998   growth-regulating factor 1 
 vvi-u.5   100259737   growth-regulating factor 4 
 sly-u.5   101245679   growth-regulating factor 4-like 
 sly-u.5   101255511   growth-regulating factor 6-like 
 sly-u.5   101263989   growth-regulating factor 4 
 osa-u.5   4330436   growth-regulating factor 4-like 
 zma-u.5   100101543   uncharacterized LOC100101543 
 zma-u.5   100125644   Growth-regulating factor 6 
 zma-u.5   100125641   growth-regulating factor 7-like 

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Top 50 coexpressed genes to 18096998 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 18096998 (ppo-u.5 coexpression data)

CoexMap"18107701"


ppoLOC18107701 | Entrez gene ID : 18107701    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 1 3 3 1 2 3 1 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006351 [list] [network] DNA-templated transcription  (264 genes)  IEA  
GO:0032502 [list] [network] developmental process  (406 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1948 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (3662 genes)  IEA  
GO MF
GO:0005524 [list] [network] ATP binding  (2559 genes)  IEA  
Protein XP_024445834.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  plas 1,  cysk 1,  cysk_plas 1  (predict for XP_024445834.1)
Subcellular
localization
TargetP
other 6,  mito 3  (predict for XP_024445834.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
18096998

.
gma-u.5
for
GRF15

.
gma-u.5
for
GRF13

.
gma-u.5
for
GRF11

.
mtr-u.5
for
25479294

.
mtr-u.5
for
11429462

.
mtr-u.5
for
25486490

.
ath-u.5
for
GRF5

.
vvi-u.5
for
100247998

.
vvi-u.5
for
100259737

.
sly-u.5
for
101245679

.
sly-u.5
for
101255511

.
sly-u.5
for
101263989

.
osa-u.5
for
4330436

.
zma-u.5
for
100101543

.
zma-u.5
for
100125644

.
zma-u.5
for
100125641

.


Ortholog ID: 673
Species ath gma gma sly sly osa zma zma vvi ppo mtr mtr tae tae hvu ghi ghi bna bna sbi sbi sot sot cit cit bdi bdi nta nta
Symbol GRF5 GRF13 GRF15 LOC101255511 LOC101267047 LOC4330903 LOC103627811 GRF1 LOC100259737 LOC18094082 LOC11429462 LOC25479294 LOC123166486 LOC123128605 LOC123404808 LOC107958784 LOC107951879 LOC111207183 LOC106381127 LOC8081935 LOC8072276 LOC102580024 LOC102591630 LOC102627866 LOC102612529 LOC100845697 LOC100842886 LOC107812877 LOC107772772
Function* growth-regulating factor 5 growth-regulating factor growth-regulating factor growth-regulating factor 6-like growth-regulating factor 4-like growth-regulating factor 1-like growth-regulating factor 1-like growth-regulating factor 1-like growth-regulating factor 4 growth-regulating factor 4 growth-regulating factor 5 growth-regulating factor 4 growth-regulating factor 5 growth-regulating factor 1 growth-regulating factor 4-like growth-regulating factor 1 growth-regulating factor 4 growth-regulating factor 5 growth-regulating factor 5-like growth-regulating factor 1 growth-regulating factor 3 growth-regulating factor 4-like growth-regulating factor 4-like growth-regulating factor 4-like growth-regulating factor 6 growth-regulating factor 1 growth-regulating factor 5 growth-regulating factor 4 growth-regulating factor 3-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00360 Phenylalanine metabolism 2
vvi00380 Tryptophan metabolism 2
vvi00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00860 Porphyrin metabolism 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta02010 ABC transporters 2
nta04981 Folate transport and metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820609 100787226 100781613 101255511 101267047 4330903 103627811 100101535 100259737 18094082 11429462 25479294 123166486 123128605 123404808 107958784 107951879 111207183 106381127 8081935 8072276 102580024 102591630 102627866 102612529 100845697 100842886 107812877 107772772
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