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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5  25479479  pentatricopeptide repeat-containing protein At1g66345, mitochondrial 
 mtr-r.5  25479479  pentatricopeptide repeat-containing protein At1g66345, mitochondrial 
 mtr-u.5  25482808  pentatricopeptide repeat-containing protein At1g66345, mitochondrial 
 gma-u.5  100789449  pentatricopeptide repeat-containing protein At1g66345, mitochondrial 
 ppo-u.5  7493541  pentatricopeptide repeat-containing protein At1g66345, mitochondrial 
 ath-u.5  AT1G66345  Pentatricopeptide repeat (PPR) superfamily protein 
 bra-r.6  103852323  pentatricopeptide repeat-containing protein At1g66345, mitochondrial 
 vvi-u.5  100853991  pentatricopeptide repeat-containing protein At1g66345, mitochondrial 
 ghi-r.1  107948814  pentatricopeptide repeat-containing protein At1g66345, mitochondrial 
 ghi-r.1  121216800  pentatricopeptide repeat-containing protein At1g66345, mitochondrial 
 bna-r.1  106426385  pentatricopeptide repeat-containing protein At1g66345, mitochondrial-like 
 bna-r.1  106392542  pentatricopeptide repeat-containing protein At1g66345, mitochondrial 
 cit-r.1  102627672  pentatricopeptide repeat-containing protein At1g66345, mitochondrial 
 sot-r.1  107063210  pentatricopeptide repeat-containing protein At1g66345, mitochondrial 
 nta-r.1  107815435  small ribosomal subunit protein mL103 (rPPR7)-like 
 osa-u.5  4327638  pentatricopeptide repeat-containing protein At1g66345, mitochondrial 
 zma-u.5  103649696  pentatricopeptide repeat-containing protein At1g66345, mitochondrial 
 zma-u.5  100383260  Pentatricopeptide repeat-containing protein mitochondrial 
 tae-r.2  123077273  pentatricopeptide repeat-containing protein At1g66345, mitochondrial 
 tae-r.2  123068765  pentatricopeptide repeat-containing protein At1g66345, mitochondrial 
 tae-r.2  123060262  pentatricopeptide repeat-containing protein At1g66345, mitochondrial 
 hvu-r.1  123442797  pentatricopeptide repeat-containing protein At1g66345, mitochondrial 
 sbi-r.1  8056551  pentatricopeptide repeat-containing protein At1g66345, mitochondrial 
 bdi-r.1  100840510  pentatricopeptide repeat-containing protein At1g66345, mitochondrial 

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Top 50 coexpressed genes to 25479479 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 25479479 (mtr-u.5 coexpression data)

CoexMap"25479479"


mtrLOC25479479 | Entrez gene ID : 25479479
Species mtr gma ppo ath bra vvi ghi bna cit sot nta osa zma tae hvu sbi bdi cre sly
Paralog 3 1 1 1 1 1 2 2 1 1 1 1 2 3 1 1 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (5045 genes)  IEA  
Protein XP_024630604.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  chlo 1,  nucl 1,  plas 1,  extr 1,  cysk 1,  cysk_nucl 1,  nucl_plas 1,  cysk_plas 1  (predict for XP_024630604.2)
Subcellular
localization
TargetP
other 8  (predict for XP_024630604.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

mtr-u.5
for
25479479


mtr-r.5
for
25479479


mtr-u.5
for
25482808


gma-u.5
for
100789449


ppo-u.5
for
7493541


ath-u.5
for
AT1G66345


bra-r.6
for
103852323


vvi-u.5
for
100853991


ghi-r.1
for
107948814


ghi-r.1
for
121216800


bna-r.1
for
106426385


bna-r.1
for
106392542


cit-r.1
for
102627672


sot-r.1
for
107063210


nta-r.1
for
107815435


osa-u.5
for
4327638


zma-u.5
for
103649696


zma-u.5
for
100383260


tae-r.2
for
123077273


tae-r.2
for
123068765


tae-r.2
for
123060262


hvu-r.1
for
123442797


sbi-r.1
for
8056551


bdi-r.1
for
100840510



Ortholog ID: 11109
Species mtr mtr gma ppo ath bra vvi ghi ghi bna bna cit sot nta osa zma zma tae tae tae hvu sbi bdi
Symbol LOC25479479 LOC25482808 LOC100789449 LOC7493541 AT1G66345 LOC103852323 LOC100853991 LOC107948814 LOC121216800 LOC106426385 LOC106392542 LOC102627672 LOC107063210 LOC107815435 LOC4327638 LOC103649696 LOC100383260 LOC123077273 LOC123068765 LOC123060262 LOC123442797 LOC8056551 LOC100840510
Function* pentatricopeptide repeat-containing protein At1g66345, mitochondrial pentatricopeptide repeat-containing protein At1g66345, mitochondrial pentatricopeptide repeat-containing protein At1g66345, mitochondrial pentatricopeptide repeat-containing protein At1g66345, mitochondrial Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At1g66345, mitochondrial pentatricopeptide repeat-containing protein At1g66345, mitochondrial pentatricopeptide repeat-containing protein At1g66345, mitochondrial pentatricopeptide repeat-containing protein At1g66345, mitochondrial pentatricopeptide repeat-containing protein At1g66345, mitochondrial-like pentatricopeptide repeat-containing protein At1g66345, mitochondrial pentatricopeptide repeat-containing protein At1g66345, mitochondrial pentatricopeptide repeat-containing protein At1g66345, mitochondrial small ribosomal subunit protein mL103 (rPPR7)-like pentatricopeptide repeat-containing protein At1g66345, mitochondrial pentatricopeptide repeat-containing protein At1g66345, mitochondrial Pentatricopeptide repeat-containing protein mitochondrial pentatricopeptide repeat-containing protein At1g66345, mitochondrial pentatricopeptide repeat-containing protein At1g66345, mitochondrial pentatricopeptide repeat-containing protein At1g66345, mitochondrial pentatricopeptide repeat-containing protein At1g66345, mitochondrial pentatricopeptide repeat-containing protein At1g66345, mitochondrial pentatricopeptide repeat-containing protein At1g66345, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 4
bna00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00520 Amino sugar and nucleotide sugar metabolism 3
tae01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 25479479 25482808 100789449 7493541 842952 103852323 100853991 107948814 121216800 106426385 106392542 102627672 107063210 107815435 4327638 103649696 100383260 123077273 123068765 123060262 123442797 8056551 100840510
The preparation time of this page was 4.0 [sec].