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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7493541   pentatricopeptide repeat-containing protein At1g66345, mitochondrial 
 ppo-r.4   7493541   pentatricopeptide repeat-containing protein At1g66345, mitochondrial 
 gma-u.5   100789449   pentatricopeptide repeat-containing protein At1g66345, mitochondrial 
 mtr-u.5   25482808   pentatricopeptide repeat-containing protein At1g66345, mitochondrial 
 mtr-u.5   25479479   pentatricopeptide repeat-containing protein At1g66345, mitochondrial 
 ath-u.5   AT1G66345   Pentatricopeptide repeat (PPR) superfamily protein 
 vvi-u.5   100853991   pentatricopeptide repeat-containing protein At1g66345, mitochondrial 
 osa-u.5   4327638   pentatricopeptide repeat-containing protein At1g66345, mitochondrial 
 zma-u.5   103649696   pentatricopeptide repeat-containing protein At1g66345, mitochondrial 
 zma-u.5   100383260   Pentatricopeptide repeat-containing protein mitochondrial 

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Top 50 coexpressed genes to 7493541 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7493541 (ppo-u.5 coexpression data)

CoexMap"7493541"


ppoLOC7493541 | Entrez gene ID : 7493541    
Species ppo gma mtr ath vvi osa zma sly sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 2 1 2 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_002305195.2 [sequence] [blastp]
XP_024454995.2 [sequence] [blastp]
XP_024454996.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 1,  cyto_mito 1  (predict for XP_002305195.2)
chlo 8,  mito 1,  cyto_mito 1  (predict for XP_024454995.2)
chlo 8,  mito 1,  cyto_mito 1  (predict for XP_024454996.2)
Subcellular
localization
TargetP
mito 6  (predict for XP_002305195.2)
mito 6  (predict for XP_024454995.2)
mito 6  (predict for XP_024454996.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7493541

.
ppo-r.4
for
7493541

.
gma-u.5
for
100789449

.
mtr-u.5
for
25482808

.
mtr-u.5
for
25479479

.
ath-u.5
for
AT1G66345

.
vvi-u.5
for
100853991

.
osa-u.5
for
4327638

.
zma-u.5
for
103649696

.
zma-u.5
for
100383260

.


Ortholog ID: 11109
Species ath gma osa zma zma bra vvi ppo mtr mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta
Symbol AT1G66345 LOC100789449 LOC4327638 LOC100383260 LOC103649696 LOC103852323 LOC100853991 LOC7493541 LOC25479479 LOC25482808 LOC123060262 LOC123068765 LOC123442797 LOC107948814 LOC121216800 LOC106426385 LOC106392542 LOC8056551 LOC107063210 LOC102627672 LOC100840510 LOC107815435
Function* Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At1g66345, mitochondrial pentatricopeptide repeat-containing protein At1g66345, mitochondrial Pentatricopeptide repeat-containing protein mitochondrial pentatricopeptide repeat-containing protein At1g66345, mitochondrial pentatricopeptide repeat-containing protein At1g66345, mitochondrial pentatricopeptide repeat-containing protein At1g66345, mitochondrial pentatricopeptide repeat-containing protein At1g66345, mitochondrial pentatricopeptide repeat-containing protein At1g66345, mitochondrial pentatricopeptide repeat-containing protein At1g66345, mitochondrial pentatricopeptide repeat-containing protein At1g66345, mitochondrial pentatricopeptide repeat-containing protein At1g66345, mitochondrial pentatricopeptide repeat-containing protein At1g66345, mitochondrial pentatricopeptide repeat-containing protein At1g66345, mitochondrial pentatricopeptide repeat-containing protein At1g66345, mitochondrial pentatricopeptide repeat-containing protein At1g66345, mitochondrial-like pentatricopeptide repeat-containing protein At1g66345, mitochondrial pentatricopeptide repeat-containing protein At1g66345, mitochondrial pentatricopeptide repeat-containing protein At1g66345, mitochondrial pentatricopeptide repeat-containing protein At1g66345, mitochondrial pentatricopeptide repeat-containing protein At1g66345, mitochondrial small ribosomal subunit protein mL103 (rPPR7)-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00520 Amino sugar and nucleotide sugar metabolism 3
tae01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 4
bna00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 842952 100789449 4327638 100383260 103649696 103852323 100853991 7493541 25479479 25482808 123060262 123068765 123442797 107948814 121216800 106426385 106392542 8056551 107063210 102627672 100840510 107815435
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