Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   25482424   small RNA degrading nuclease 5 
 mtr-r.5   25482424   small RNA degrading nuclease 5 
 gma-u.5   100802793   small RNA degrading nuclease 5 
 gma-u.5   100796963   small RNA degrading nuclease 5 
 ppo-u.5   7469197   small RNA degrading nuclease 5 
 ath-u.5   AT5G25800   Polynucleotidyl transferase, ribonuclease H-like superfamily protein 
 bra-r.6   103854733   small RNA degrading nuclease 5 
 vvi-u.5   100242014   small RNA degrading nuclease 5 
 ghi-r.1   107910416   small RNA degrading nuclease 5 
 ghi-r.1   107952030   small RNA degrading nuclease 5 
 bna-r.1   106348551   small RNA degrading nuclease 5-like 
 bna-r.1   106403684   small RNA degrading nuclease 5 
 bna-r.1   106348763   small RNA degrading nuclease 5-like 
 cit-r.1   102612254   small RNA degrading nuclease 5 
 sly-u.5   101258362   small RNA degrading nuclease 5 
 sot-r.1   102601294   small RNA degrading nuclease 5 
 nta-r.1   107815163   small RNA degrading nuclease 5-like 
 nta-r.1   107796462   small RNA degrading nuclease 5 
 osa-u.5   9269093   small RNA degrading nuclease 5 
 zma-u.5   100383366   Small RNA degrading nuclease 5 
 zma-u.5   100501283   uncharacterized LOC100501283 
 tae-r.2   123079355   small RNA degrading nuclease 5 
 tae-r.2   123070968   small RNA degrading nuclease 5 
 tae-r.2   123062223   small RNA degrading nuclease 5 
 hvu-r.1   123444547   small RNA degrading nuclease 5 
 sbi-r.1   110429827   small RNA degrading nuclease 5 
 bdi-r.1   100836381   small RNA degrading nuclease 5 
 cre-r.1   CHLRE_14g610663v5   uncharacterized protein 

close


Top 50 coexpressed genes to 25482424 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 25482424 (mtr-u.5 coexpression data)

CoexMap"25482424"


mtrLOC25482424 | Entrez gene ID : 25482424      
Species mtr gma ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 2 1 1 1 1 2 3 1 1 1 2 1 2 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG mtr03008 [list] [network] Ribosome biogenesis in eukaryotes (1525 genes)
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (2707 genes)  IEA  
GO MF
GO:0004527 [list] [network] exonuclease activity  (97 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (4267 genes)  IEA  
Protein XP_013466430.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 1,  vacu 1,  plas 1,  extr 1,  cyto_nucl 1,  cysk_nucl 1,  E.R._vacu 1  (predict for XP_013466430.2)
Subcellular
localization
TargetP
chlo 7  (predict for XP_013466430.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
25482424
mtr-r.5
for
25482424
gma-u.5
for
100802793
gma-u.5
for
100796963
ppo-u.5
for
7469197
ath-u.5
for
AT5G25800
bra-r.6
for
103854733
vvi-u.5
for
100242014
ghi-r.1
for
107910416
ghi-r.1
for
107952030
bna-r.1
for
106348551
bna-r.1
for
106403684
bna-r.1
for
106348763
cit-r.1
for
102612254
sly-u.5
for
101258362
sot-r.1
for
102601294
nta-r.1
for
107815163
nta-r.1
for
107796462
osa-u.5
for
9269093
zma-u.5
for
100383366
zma-u.5
for
100501283
tae-r.2
for
123079355
tae-r.2
for
123070968
tae-r.2
for
123062223
hvu-r.1
for
123444547
sbi-r.1
for
110429827
bdi-r.1
for
100836381
cre-r.1
for
CHLRE_14g610663v5


Ortholog ID: 7737
Species mtr gma gma ppo ath bra vvi ghi ghi bna bna bna cit sly sot nta nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol LOC25482424 LOC100802793 LOC100796963 LOC7469197 AT5G25800 LOC103854733 LOC100242014 LOC107910416 LOC107952030 LOC106348551 LOC106403684 LOC106382657 LOC102612254 LOC101258362 LOC102601294 LOC107815163 LOC107796462 LOC9269093 LOC100383366 LOC100501283 LOC123079355 LOC123070968 LOC123062223 LOC123444547 LOC110429827 LOC100836381 CHLRE_14g610663v5
Function* small RNA degrading nuclease 5 small RNA degrading nuclease 5 small RNA degrading nuclease 5 small RNA degrading nuclease 5 Polynucleotidyl transferase, ribonuclease H-like superfamily protein small RNA degrading nuclease 5 small RNA degrading nuclease 5 small RNA degrading nuclease 5 small RNA degrading nuclease 5 small RNA degrading nuclease 5-like small RNA degrading nuclease 5 small RNA degrading nuclease 5-like small RNA degrading nuclease 5 small RNA degrading nuclease 5 small RNA degrading nuclease 5 small RNA degrading nuclease 5-like small RNA degrading nuclease 5 small RNA degrading nuclease 5 Small RNA degrading nuclease 5 uncharacterized LOC100501283 small RNA degrading nuclease 5 small RNA degrading nuclease 5 small RNA degrading nuclease 5 small RNA degrading nuclease 5 small RNA degrading nuclease 5 small RNA degrading nuclease 5 uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
mtr03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 4
gma03008 Ribosome biogenesis in eukaryotes 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
bra03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
bna03018 RNA degradation 4
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 5
bna03018 RNA degradation 4
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
bna03018 RNA degradation 4
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 2
sly03015 mRNA surveillance pathway 2
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00740 Riboflavin metabolism 3
nta01240 Biosynthesis of cofactors 3
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03083 Polycomb repressive complex 2
zma03030 DNA replication 2
zma03410 Base excision repair 2
zma04120 Ubiquitin mediated proteolysis 2
zma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
tae00970 Aminoacyl-tRNA biosynthesis 2
tae03022 Basal transcription factors 2
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
tae03013 Nucleocytoplasmic transport 4
tae00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04122 Sulfur relay system 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 25482424 100802793 100796963 7469197 832649 103854733 100242014 107910416 107952030 106348551 106403684 106382657 102612254 101258362 102601294 107815163 107796462 9269093 100383366 100501283 123079355 123070968 123062223 123444547 110429827 100836381 5724570
The preparation time of this page was 0.2 [sec].