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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   25482625   transcription factor SRM1 
 mtr-r.5   25482625   transcription factor SRM1 
 mtr-u.5   25493938   transcription factor MYBS1 
 gma-u.5   MYB109   MYB transcription factor MYB109 
 gma-u.5   100812196   transcription factor SRM1 
 ppo-u.5   7457158   transcription factor SRM1 
 ppo-u.5   18103714   transcription factor MYBS1 
 ppo-u.5   7486354   transcription factor SRM1 
 ath-u.5   AT5G08520   Duplicated homeodomain-like superfamily protein 
 ath-u.5   AT1G49010   Duplicated homeodomain-like superfamily protein 
 vvi-u.5   100268113   transcription factor SRM1 
 vvi-u.5   100245771   transcription factor MYBS1 
 sly-u.5   101260117   transcription factor MYBS1 
 sly-u.5   101245350   transcription factor SRM1-like 
 osa-u.5   4323963   transcription factor MYBS1-like 
 osa-u.5   4337399   transcription factor SRM1 
 zma-u.5   100279751   uncharacterized LOC100279751 
 zma-u.5   103634651   transcription factor MYBS1 
 zma-u.5   118475680   transcription factor MYBS1-like 

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Top 50 coexpressed genes to 25482625 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 25482625 (mtr-u.5 coexpression data)

CoexMap"25482625"


mtrLOC25482625 | Entrez gene ID : 25482625      
Species mtr gma ppo ath vvi sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 3 2 3 2 2 2 2 3 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003677 [list] [network] DNA binding  (2104 genes)  IEA  
Protein XP_024631467.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  chlo 1,  extr 1,  vacu 1  (predict for XP_024631467.1)
Subcellular
localization
TargetP
other 9  (predict for XP_024631467.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
25482625

.
mtr-r.5
for
25482625

.
mtr-u.5
for
25493938

.
gma-u.5
for
MYB109

.
gma-u.5
for
100812196

.
ppo-u.5
for
7457158

.
ppo-u.5
for
18103714

.
ppo-u.5
for
7486354

.
ath-u.5
for
AT5G08520

.
ath-u.5
for
AT1G49010

.
vvi-u.5
for
100268113

.
vvi-u.5
for
100245771

.
sly-u.5
for
101260117

.
sly-u.5
for
101245350

.
osa-u.5
for
4323963

.
osa-u.5
for
4337399

.
zma-u.5
for
100279751

.
zma-u.5
for
103634651

.
zma-u.5
for
118475680

.


Ortholog ID: 1638
Species ath ath gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol AT5G08520 AT1G49010 LOC100779792 LOC101260117 LOC101245350 LOC4323963 LOC4337399 LOC118475680 LOC100279751 LOC103832964 LOC103871425 LOC100245771 LOC100268113 LOC7457158 LOC7486354 LOC25482625 LOC123151650 LOC123055197 LOC123408678 LOC123428351 LOC107886871 LOC107920429 LOC106381323 LOC125593102 CHLRE_10g430750v5 LOC8074545 LOC8085866 LOC102597153 LOC102604472 LOC102617702 LOC102615932 LOC100840715 LOC100822300 LOC107761153 LOC107815176
Function* Duplicated homeodomain-like superfamily protein Duplicated homeodomain-like superfamily protein transcription factor SRM1 transcription factor MYBS1 transcription factor SRM1-like transcription factor MYBS1-like transcription factor SRM1 transcription factor MYBS1-like uncharacterized LOC100279751 transcription factor MYBS1 transcription factor MYBS1 transcription factor MYBS1 transcription factor SRM1 transcription factor SRM1 transcription factor SRM1 transcription factor SRM1 transcription factor MYBS1 transcription factor SRM1 transcription factor MYBS1-like transcription factor SRM1-like transcription factor SRM1 transcription factor SRM1 transcription factor MYBS1-like transcription factor SRM1-like uncharacterized protein transcription factor MYBS1 transcription factor SRM1 transcription factor DIVARICATA-like transcription factor DIVARICATA transcription factor SRM1 transcription factor MYBS1 transcription factor MYBS1 transcription factor SRM1 transcription factor MYBS1 transcription factor MYBS1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
osa04712 Circadian rhythm - plant 3
osa03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 7
bra00710 Carbon fixation by Calvin cycle 6
bra00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00062 Fatty acid elongation 2
bra01212 Fatty acid metabolism 2
bra04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00790 Folate biosynthesis 2
tae01240 Biosynthesis of cofactors 2
tae04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00999 Biosynthesis of various plant secondary metabolites 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00620 Pyruvate metabolism 2
cit01240 Biosynthesis of cofactors 2
cit00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 2
bdi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 2
nta00670 One carbon pool by folate 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830751 841324 100779792 101260117 101245350 4323963 4337399 118475680 100279751 103832964 103871425 100245771 100268113 7457158 7486354 25482625 123151650 123055197 123408678 123428351 107886871 107920429 106381323 125593102 66054993 8074545 8085866 102597153 102604472 102617702 102615932 100840715 100822300 107761153 107815176
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