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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   25484001   auxin response factor 18 
 mtr-r.5   25484001   auxin response factor 18 
 mtr-u.5   11417580   auxin response factor 10 
 mtr-u.5   25492440   auxin response factor 10 
 gma-u.5   100778135   auxin response factor 18 
 gma-u.5   100791442   auxin response factor 18 
 gma-u.5   100808472   auxin response factor 18 
 ppo-u.5   7491129   auxin response factor 18 
 ppo-u.5   7494951   auxin response factor 18 
 ppo-u.5   18098203   auxin response factor 10 
 ath-u.5   ARF10   auxin response factor 10 
 ath-u.5   ARF16   auxin response factor 16 
 bra-r.6   ARF16-1   auxin response factor 16 
 bra-r.6   ARF10   auxin response factor 10 
 bra-r.6   ARF16-2   auxin response factor 16 
 vvi-u.5   100265118   auxin response factor 18 
 vvi-u.5   100251645   auxin response factor 18 
 vvi-u.5   100256989   auxin response factor 18 
 ghi-r.1   107902442   auxin response factor 18 
 ghi-r.1   107904267   auxin response factor 18 
 ghi-r.1   107906237   auxin response factor 18-like 
 bna-r.1   106355427   auxin response factor 10 
 bna-r.1   106390396   auxin response factor 16-like 
 bna-r.1   106396551   auxin response factor 10 
 cit-r.1   102624910   auxin response factor 16 
 cit-r.1   102623485   auxin response factor 10 
 cit-r.1   102611587   auxin response factor 18-like 
 sly-u.5   ARF10A   auxin response factor 10A 
 sly-u.5   ARF10B   auxin response factor 
 sly-u.5   ARF16A   auxin response factor 16A 
 sot-r.1   102599257   auxin response factor 18-like 
 sot-r.1   102586871   auxin response factor 18 
 sot-r.1   102592252   auxin response factor 18-like 
 nta-r.1   107772993   auxin response factor 16 
 nta-r.1   107760064   auxin response factor 18 
 nta-r.1   107781721   auxin response factor 16 
 osa-u.5   4341882   auxin response factor 18-like 
 osa-u.5   4330045   auxin response factor 8-like 
 osa-u.5   4348918   auxin response factor 22-like 
 zma-u.5   100384553   uncharacterized LOC100384553 
 zma-u.5   100304210   uncharacterized LOC100304210 
 zma-u.5   100272511   uncharacterized LOC100272511 
 tae-r.2   123045925   auxin response factor 22 
 tae-r.2   123121554   auxin response factor 22 
 tae-r.2   123156694   auxin response factor 18 
 hvu-r.1   123408114   auxin response factor 18-like 
 hvu-r.1   123404596   auxin response factor 8-like 
 hvu-r.1   123431291   auxin response factor 22-like 
 sbi-r.1   8064947   auxin response factor 18 
 sbi-r.1   8067406   auxin response factor 22 
 sbi-r.1   8074777   auxin response factor 8 
 bdi-r.1   100830217   auxin response factor 22 
 bdi-r.1   100842577   auxin response factor 8 
 bdi-r.1   100824778   auxin response factor 18 

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Top 50 coexpressed genes to 25484001 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 25484001 (mtr-u.5 coexpression data)

CoexMap"25484001"


mtrLOC25484001 | Entrez gene ID : 25484001      
Species mtr gma ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 3 2 3 3 3 3 3 3 3 3 3 3 3 3 3 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG mtr04075 [list] [network] Plant hormone signal transduction (454 genes)
GO BP
GO:0009725 [list] [network] response to hormone  (374 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1635 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2707 genes)  IEA  
GO MF
GO:0003677 [list] [network] DNA binding  (2104 genes)  IEA  
Protein XP_013468193.1 [sequence] [blastp]
XP_013468194.1 [sequence] [blastp]
XP_039683510.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto 1,  vacu 1  (predict for XP_013468193.1)
nucl 9  (predict for XP_013468194.1)
nucl 9  (predict for XP_039683510.1)
Subcellular
localization
TargetP
other 4,  chlo 3,  scret 3  (predict for XP_013468193.1)
other 8,  chlo 3  (predict for XP_013468194.1)
other 3,  scret 3  (predict for XP_039683510.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
25484001
mtr-r.5
for
25484001
mtr-u.5
for
11417580
mtr-u.5
for
25492440
gma-u.5
for
100778135
gma-u.5
for
100791442
gma-u.5
for
100808472
ppo-u.5
for
7491129
ppo-u.5
for
7494951
ppo-u.5
for
18098203
ath-u.5
for
ARF10
ath-u.5
for
ARF16
bra-r.6
for
ARF16-1
bra-r.6
for
ARF10
bra-r.6
for
ARF16-2
vvi-u.5
for
100265118
vvi-u.5
for
100251645
vvi-u.5
for
100256989
ghi-r.1
for
107902442
ghi-r.1
for
107904267
ghi-r.1
for
107906237
bna-r.1
for
106355427
bna-r.1
for
106390396
bna-r.1
for
106396551
cit-r.1
for
102624910
cit-r.1
for
102623485
cit-r.1
for
102611587
sly-u.5
for
ARF10A
sly-u.5
for
ARF10B
sly-u.5
for
ARF16A
sot-r.1
for
102599257
sot-r.1
for
102586871
sot-r.1
for
102592252
nta-r.1
for
107772993
nta-r.1
for
107760064
nta-r.1
for
107781721
osa-u.5
for
4341882
osa-u.5
for
4330045
osa-u.5
for
4348918
zma-u.5
for
100384553
zma-u.5
for
100304210
zma-u.5
for
100272511
tae-r.2
for
123045925
tae-r.2
for
123121554
tae-r.2
for
123156694
hvu-r.1
for
123408114
hvu-r.1
for
123404596
hvu-r.1
for
123431291
sbi-r.1
for
8064947
sbi-r.1
for
8067406
sbi-r.1
for
8074777
bdi-r.1
for
100830217
bdi-r.1
for
100842577
bdi-r.1
for
100824778


Ortholog ID: 1303
Species mtr mtr mtr gma gma gma ppo ppo ppo ath ath bra bra bra vvi vvi vvi ghi ghi ghi bna bna bna cit cit cit sly sly sly sot sot sot nta nta nta osa osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi sbi bdi bdi bdi
Symbol LOC25484001 LOC11417580 LOC25492440 LOC100808472 LOC100810558 LOC100814686 LOC7491129 LOC7494951 LOC18098203 ARF10 ARF16 ARF16-1 ARF10 ARF16-2 LOC100265118 LOC100251645 LOC100256989 LOC107904267 LOC107944087 LOC121222529 LOC106411312 LOC106442809 LOC106450799 LOC102624910 LOC102623485 LOC102611587 ARF10A ARF10B ARF16A LOC102599257 LOC102586871 LOC102592252 LOC107828000 LOC107814687 LOC107794188 LOC4341882 LOC4330045 LOC4348918 LOC100384553 LOC100304210 LOC100280136 LOC123045925 LOC123181091 LOC123137538 LOC123408114 LOC123404596 LOC123431291 LOC8064947 LOC8067406 LOC8074777 LOC100830217 LOC100842577 LOC100824778
Function* auxin response factor 18 auxin response factor 10 auxin response factor 10 auxin response factor 18 auxin response factor 18 auxin response factor 18 auxin response factor 18 auxin response factor 18 auxin response factor 10 auxin response factor 10 auxin response factor 16 auxin response factor 16 auxin response factor 10 auxin response factor 16 auxin response factor 18 auxin response factor 18 auxin response factor 18 auxin response factor 18 auxin response factor 18 auxin response factor 16 auxin response factor 16 auxin response factor 16-like auxin response factor 16-like auxin response factor 16 auxin response factor 10 auxin response factor 18-like auxin response factor 10A auxin response factor auxin response factor 16A auxin response factor 18-like auxin response factor 18 auxin response factor 18-like auxin response factor 18 auxin response factor 18 auxin response factor 18 auxin response factor 18-like auxin response factor 8-like auxin response factor 22-like uncharacterized LOC100384553 uncharacterized LOC100304210 Auxin response factor 16 auxin response factor 22 auxin response factor 22 auxin response factor 8 auxin response factor 18-like auxin response factor 8-like auxin response factor 22-like auxin response factor 18 auxin response factor 22 auxin response factor 8 auxin response factor 22 auxin response factor 8 auxin response factor 18
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 3
gma00260 Glycine, serine and threonine metabolism 2
gma00630 Glyoxylate and dicarboxylate metabolism 2
gma00670 One carbon pool by folate 2
gma00785 Lipoic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00906 Carotenoid biosynthesis 2
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 3
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 4
bra04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 3
bra04142 Lysosome 2
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 5
bna00240 Pyrimidine metabolism 5
bna00760 Nicotinate and nicotinamide metabolism 5
bna01232 Nucleotide metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00310 Lysine degradation 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04712 Circadian rhythm - plant 3
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00620 Pyruvate metabolism 3
sot00710 Carbon fixation by Calvin cycle 3
sot01200 Carbon metabolism 3
sot00500 Starch and sucrose metabolism 2
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta00940 Phenylpropanoid biosynthesis 2
nta04146 Peroxisome 2
nta03018 RNA degradation 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
nta00531 Glycosaminoglycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 5
osa04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 4
zma00010 Glycolysis / Gluconeogenesis 2
zma00620 Pyruvate metabolism 2
zma00710 Carbon fixation by Calvin cycle 2
zma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 6
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 5
tae00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 7
sbi00591 Linoleic acid metabolism 2
sbi00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04626 Plant-pathogen interaction 2
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 25484001 11417580 25492440 100808472 100810558 100814686 7491129 7494951 18098203 817382 829131 103852975 103829732 103861927 100265118 100251645 100256989 107904267 107944087 121222529 106411312 106442809 106450799 102624910 102623485 102611587 100529137 100736511 101246373 102599257 102586871 102592252 107828000 107814687 107794188 4341882 4330045 4348918 100384553 100304210 100280136 123045925 123181091 123137538 123408114 123404596 123431291 8064947 8067406 8074777 100830217 100842577 100824778
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