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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8064947   auxin response factor 18 
 zma-u.5   100384553   uncharacterized LOC100384553 
 zma-u.5   100304210   uncharacterized LOC100304210 
 zma-u.5   100272511   uncharacterized LOC100272511 
 osa-u.5   4341882   auxin response factor 18-like 
 osa-u.5   4330045   auxin response factor 8-like 
 osa-u.5   4348918   auxin response factor 22-like 
 ath-u.5   ARF10   auxin response factor 10 
 ath-u.5   ARF16   auxin response factor 16 
 gma-u.5   100778135   auxin response factor 18 
 gma-u.5   100791442   auxin response factor 18 
 gma-u.5   100808472   auxin response factor 18 
 sly-u.5   ARF10A   auxin response factor 10A 
 sly-u.5   ARF10B   auxin response factor 
 sly-u.5   ARF16A   auxin response factor 16A 
 vvi-u.5   100265118   auxin response factor 18 
 vvi-u.5   100251645   auxin response factor 18 
 vvi-u.5   100256989   auxin response factor 18 
 ppo-u.5   7491129   auxin response factor 18 
 ppo-u.5   7494951   auxin response factor 18 
 ppo-u.5   7468418   auxin response factor 18 
 mtr-u.5   11417580   auxin response factor 10 
 mtr-u.5   25492440   auxin response factor 10 
 mtr-u.5   25484001   auxin response factor 18 

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Top 50 coexpressed genes to 8064947 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8064947 (sbi-r.1 coexpression data)

CoexMap"8064947"


sbiLOC8064947 | Entrez gene ID : 8064947      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 3 3 2 3 3 3 3 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi04075 [list] [network] Plant hormone signal transduction (389 genes)
GO BP
GO:0009725 [list] [network] response to hormone  (328 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1596 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2977 genes)  IEA  
GO MF
GO:0003677 [list] [network] DNA binding  (1849 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_002437473.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 1,  plas 1,  cyto_plas 1  (predict for XP_002437473.1)
Subcellular
localization
TargetP
other 8  (predict for XP_002437473.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8064947

.
zma-u.5
for
100384553

.
zma-u.5
for
100304210

.
zma-u.5
for
100272511

.
osa-u.5
for
4341882

.
osa-u.5
for
4330045

.
osa-u.5
for
4348918

.
ath-u.5
for
ARF10

.
ath-u.5
for
ARF16

.
gma-u.5
for
100778135

.
gma-u.5
for
100791442

.
gma-u.5
for
100808472

.
sly-u.5
for
ARF10A

.
sly-u.5
for
ARF10B

.
sly-u.5
for
ARF16A

.
vvi-u.5
for
100265118

.
vvi-u.5
for
100251645

.
vvi-u.5
for
100256989

.
ppo-u.5
for
7491129

.
ppo-u.5
for
7494951

.
ppo-u.5
for
7468418

.
mtr-u.5
for
11417580

.
mtr-u.5
for
25492440

.
mtr-u.5
for
25484001

.


Ortholog ID: 1303
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna sbi sbi sot sot cit cit bdi bdi nta nta
Symbol ARF16 ARF10 LOC100808472 LOC100810558 ARF16A ARF10A LOC4330045 LOC4341882 LOC100384553 LOC100280136 ARF16-2 ARF16-1 LOC100265118 LOC100256989 LOC18098203 LOC7494951 LOC25492440 LOC25484001 LOC123137538 LOC123181091 LOC123404596 LOC123431291 LOC107904267 LOC121222529 LOC106411312 LOC106442809 LOC8074777 LOC8067406 LOC102599257 LOC102586871 LOC102611587 LOC102624910 LOC100830217 LOC100842577 LOC107794188 LOC107814687
Function* auxin response factor 16 auxin response factor 10 auxin response factor 18 auxin response factor 18 auxin response factor 16A auxin response factor 10A auxin response factor 8-like auxin response factor 18-like uncharacterized LOC100384553 Auxin response factor 16 auxin response factor 16 auxin response factor 16 auxin response factor 18 auxin response factor 18 auxin response factor 10 auxin response factor 18 auxin response factor 10 auxin response factor 18 auxin response factor 8 auxin response factor 22 auxin response factor 8-like auxin response factor 22-like auxin response factor 18 auxin response factor 16 auxin response factor 16 auxin response factor 16-like auxin response factor 8 auxin response factor 22 auxin response factor 18-like auxin response factor 18 auxin response factor 18-like auxin response factor 16 auxin response factor 22 auxin response factor 8 auxin response factor 18 auxin response factor 18
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 3
gma00260 Glycine, serine and threonine metabolism 2
gma00630 Glyoxylate and dicarboxylate metabolism 2
gma00670 One carbon pool by folate 2
gma00785 Lipoic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 5
osa04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 4
zma00010 Glycolysis / Gluconeogenesis 2
zma00620 Pyruvate metabolism 2
zma00710 Carbon fixation by Calvin cycle 2
zma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 3
bra04142 Lysosome 2
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 4
bra04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 3
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 5
tae00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04626 Plant-pathogen interaction 2
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00620 Pyruvate metabolism 3
sot00710 Carbon fixation by Calvin cycle 3
sot01200 Carbon metabolism 3
sot00500 Starch and sucrose metabolism 2
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00310 Lysine degradation 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
nta00531 Glycosaminoglycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta00940 Phenylpropanoid biosynthesis 2
nta04146 Peroxisome 2
nta03018 RNA degradation 2
nta03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829131 817382 100808472 100810558 101246373 100529137 4330045 4341882 100384553 100280136 103861927 103852975 100265118 100256989 18098203 7494951 25492440 25484001 123137538 123181091 123404596 123431291 107904267 121222529 106411312 106442809 8074777 8067406 102599257 102586871 102611587 102624910 100830217 100842577 107794188 107814687
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