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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   25486505   uncharacterized LOC25486505 
 mtr-r.5   25486505   uncharacterized LOC25486505 
 mtr-u.5   25494176   uncharacterized LOC25494176 
 mtr-u.5   120579503   F-box/LRR-repeat protein fbxl-1 
 gma-u.5   100808150   uncharacterized LOC100808150 
 gma-u.5   100798274   F-box/LRR-repeat protein 3 
 gma-u.5   100797833   leucine-rich repeat-containing protein 
 ppo-u.5   18100339   uncharacterized LOC18100339 
 ppo-u.5   7492293   uncharacterized LOC7492293 
 ath-u.5   AT2G06040   F-box/LRR protein 
 vvi-u.5   100244043   uncharacterized LOC100244043 
 vvi-u.5   100252702   uncharacterized LOC100252702 
 sly-u.5   101267038   DNA repair protein RAD7-like 
 sly-u.5   101263833   uncharacterized LOC101263833 
 osa-u.5   4345759   uncharacterized LOC4345759 
 zma-u.5   103653335   uncharacterized LOC103653335 
 zma-u.5   103643234   uncharacterized LOC103643234 

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Top 50 coexpressed genes to 25486505 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 25486505 (mtr-u.5 coexpression data)

CoexMap"25486505"


mtrLOC25486505 | Entrez gene ID : 25486505      
Species mtr gma ppo ath vvi sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 4 3 2 1 2 2 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0031146 [list] [network] SCF-dependent proteasomal ubiquitin-dependent protein catabolic process  (105 genes)  IEA  
GO CC
GO:0019005 [list] [network] SCF ubiquitin ligase complex  (110 genes)  IEA  
GO MF
Protein XP_013463542.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  nucl 4,  mito 1,  cysk 1  (predict for XP_013463542.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_013463542.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
25486505
mtr-r.5
for
25486505
mtr-u.5
for
25494176
mtr-u.5
for
120579503
gma-u.5
for
100808150
gma-u.5
for
100798274
gma-u.5
for
100797833
ppo-u.5
for
18100339
ppo-u.5
for
7492293
ath-u.5
for
AT2G06040
vvi-u.5
for
100244043
vvi-u.5
for
100252702
sly-u.5
for
101267038
sly-u.5
for
101263833
osa-u.5
for
4345759
zma-u.5
for
103653335
zma-u.5
for
103643234


Ortholog ID: 4853
Species mtr gma gma ppo ppo ath bra vvi vvi ghi ghi bna bna cit sly sly sot sot nta nta osa zma zma tae tae hvu sbi bdi cre
Symbol LOC25494176 LOC100798274 LOC100797833 LOC18100339 LOC7492293 AT2G06040 LOC103828497 LOC100252702 LOC100244043 LOC107929937 LOC121231965 LOC106432265 LOC106357748 LOC102618698 LOC101267038 LOC101263833 LOC102604140 LOC102598857 LOC107783261 LOC107800926 LOC4345759 LOC103643234 LOC103653335 LOC123149123 LOC123166063 LOC123411020 LOC8080646 LOC100825936 CHLRE_12g559050v5
Function* uncharacterized LOC25494176 F-box/LRR-repeat protein 3 leucine-rich repeat-containing protein uncharacterized LOC18100339 uncharacterized LOC7492293 F-box/LRR protein uncharacterized LOC103828497 uncharacterized LOC100252702 uncharacterized LOC100244043 uncharacterized LOC107929937 F-box/LRR-repeat protein 4 uncharacterized LOC106432265 uncharacterized LOC106357748 uncharacterized LOC102618698 DNA repair protein RAD7-like uncharacterized LOC101263833 uncharacterized LOC102604140 uncharacterized LOC102598857 uncharacterized LOC107783261 uncharacterized LOC107800926 uncharacterized LOC4345759 uncharacterized LOC103643234 uncharacterized LOC103653335 uncharacterized LOC123149123 uncharacterized LOC123166063 uncharacterized LOC123411020 uncharacterized LOC8080646 uncharacterized LOC100825936 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00510 N-Glycan biosynthesis 3
gma00513 Various types of N-glycan biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03430 Mismatch repair 3
ath03008 Ribosome biogenesis in eukaryotes 2
ath03410 Base excision repair 2
ath03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 2
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 4
bna03430 Mismatch repair 4
bna03440 Homologous recombination 4
bna03013 Nucleocytoplasmic transport 2
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 2
bna03430 Mismatch repair 2
bna03440 Homologous recombination 2
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 8
sly03430 Mismatch repair 3
sly03008 Ribosome biogenesis in eukaryotes 2
sly03420 Nucleotide excision repair 2
sly03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00270 Cysteine and methionine metabolism 4
sot00260 Glycine, serine and threonine metabolism 4
sot01230 Biosynthesis of amino acids 4
sot01200 Carbon metabolism 3
sot00750 Vitamin B6 metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 4
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04145 Phagosome 2
nta04517 IgSF CAM signaling 2
nta04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 4
tae03013 Nucleocytoplasmic transport 3
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 4
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 9
hvu03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 25494176 100798274 100797833 18100339 7492293 815159 103828497 100252702 100244043 107929937 121231965 106432265 106357748 102618698 101267038 101263833 102604140 102598857 107783261 107800926 4345759 103643234 103653335 123149123 123166063 123411020 8080646 100825936 5728391
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