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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   25487810   mediator of RNA polymerase II transcription subunit 7a 
 mtr-r.5   25487810   mediator of RNA polymerase II transcription subunit 7a 
 mtr-u.5   25497291   mediator of RNA polymerase II transcription subunit 7a 
 gma-u.5   100812231   mediator of RNA polymerase II transcription subunit 7-like 
 gma-u.5   100792250   mediator of RNA polymerase II transcription subunit 7-like 
 ppo-u.5   7469914   mediator of RNA polymerase II transcription subunit 7a 
 ath-u.5   AT5G03500   Mediator complex, subunit Med7 
 ath-u.5   AT5G03220   Mediator complex, subunit Med7 
 bra-r.6   103850482   mediator of RNA polymerase II transcription subunit 7a 
 bra-r.6   103847399   mediator of RNA polymerase II transcription subunit 7a 
 vvi-u.5   100257245   mediator of RNA polymerase II transcription subunit 7a 
 ghi-r.1   107924169   mediator of RNA polymerase II transcription subunit 7a 
 ghi-r.1   107934559   mediator of RNA polymerase II transcription subunit 7a 
 bna-r.1   106372624   mediator of RNA polymerase II transcription subunit 7a 
 bna-r.1   106424059   mediator of RNA polymerase II transcription subunit 7a 
 bna-r.1   106425283   mediator of RNA polymerase II transcription subunit 7a 
 cit-r.1   102624512   mediator of RNA polymerase II transcription subunit 7a 
 sly-u.5   101262307   mediator of RNA polymerase II transcription subunit 7a 
 sot-r.1   102597158   mediator of RNA polymerase II transcription subunit 7a-like 
 nta-r.1   107770575   mediator of RNA polymerase II transcription subunit 7a-like 
 nta-r.1   107829808   mediator of RNA polymerase II transcription subunit 7a-like 
 osa-u.5   4337290   mediator of RNA polymerase II transcription subunit 7a 
 zma-u.5   100282247   cofactor required for Sp1 transcriptional activation subunit 9 
 zma-u.5   100274258   uncharacterized LOC100274258 
 tae-r.2   123054812   mediator of RNA polymerase II transcription subunit 7a 
 tae-r.2   123046981   mediator of RNA polymerase II transcription subunit 7a 
 tae-r.2   123190653   mediator of RNA polymerase II transcription subunit 7a 
 hvu-r.1   123428035   mediator of RNA polymerase II transcription subunit 7a-like 
 sbi-r.1   8082541   mediator of RNA polymerase II transcription subunit 7b 
 bdi-r.1   100825260   mediator of RNA polymerase II transcription subunit 7a 
 cre-r.1   CHLRE_01g062902v5   uncharacterized protein 

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Top 50 coexpressed genes to 25487810 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 25487810 (mtr-u.5 coexpression data)

CoexMap"25487810"


mtrLOC25487810 | Entrez gene ID : 25487810      
Species mtr gma ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 2 1 2 2 1 2 3 1 1 1 2 1 2 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (425 genes)  IEA  
GO CC
GO:0070847 [list] [network] core mediator complex  (9 genes)  IEA  
GO:0016592 [list] [network] mediator complex  (47 genes)  IEA  
GO MF
GO:0003712 [list] [network] transcription coregulator activity  (162 genes)  IEA  
Protein XP_013465303.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto_nucl 3,  mito 1,  plas 1,  mito_plas 1  (predict for XP_013465303.1)
Subcellular
localization
TargetP
other 7,  mito 3  (predict for XP_013465303.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
25487810
mtr-r.5
for
25487810
mtr-u.5
for
25497291
gma-u.5
for
100812231
gma-u.5
for
100792250
ppo-u.5
for
7469914
ath-u.5
for
AT5G03500
ath-u.5
for
AT5G03220
bra-r.6
for
103850482
bra-r.6
for
103847399
vvi-u.5
for
100257245
ghi-r.1
for
107924169
ghi-r.1
for
107934559
bna-r.1
for
106372624
bna-r.1
for
106424059
bna-r.1
for
106425283
cit-r.1
for
102624512
sly-u.5
for
101262307
sot-r.1
for
102597158
nta-r.1
for
107770575
nta-r.1
for
107829808
osa-u.5
for
4337290
zma-u.5
for
100282247
zma-u.5
for
100274258
tae-r.2
for
123054812
tae-r.2
for
123046981
tae-r.2
for
123190653
hvu-r.1
for
123428035
sbi-r.1
for
8082541
bdi-r.1
for
100825260
cre-r.1
for
CHLRE_01g062902v5


Ortholog ID: 7726
Species mtr mtr gma gma ppo ath ath bra bra vvi ghi ghi bna bna bna cit sly sot nta nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol LOC25487810 LOC25497291 LOC100812231 LOC100792250 LOC7469914 AT5G03500 AT5G03220 LOC103850482 LOC103847399 LOC100257245 LOC107924169 LOC107934559 LOC106372624 LOC106424059 LOC106425283 LOC102624512 LOC101262307 LOC102597158 LOC107770575 LOC107829808 LOC4337290 LOC100282247 LOC100274258 LOC123054812 LOC123046981 LOC123190653 LOC123428035 LOC8082541 LOC100825260 CHLRE_01g062902v5
Function* mediator of RNA polymerase II transcription subunit 7a mediator of RNA polymerase II transcription subunit 7a mediator of RNA polymerase II transcription subunit 7-like mediator of RNA polymerase II transcription subunit 7-like mediator of RNA polymerase II transcription subunit 7a Mediator complex, subunit Med7 Mediator complex, subunit Med7 mediator of RNA polymerase II transcription subunit 7a mediator of RNA polymerase II transcription subunit 7a mediator of RNA polymerase II transcription subunit 7a mediator of RNA polymerase II transcription subunit 7a mediator of RNA polymerase II transcription subunit 7a mediator of RNA polymerase II transcription subunit 7a mediator of RNA polymerase II transcription subunit 7a mediator of RNA polymerase II transcription subunit 7a mediator of RNA polymerase II transcription subunit 7a mediator of RNA polymerase II transcription subunit 7a mediator of RNA polymerase II transcription subunit 7a-like mediator of RNA polymerase II transcription subunit 7a-like mediator of RNA polymerase II transcription subunit 7a-like mediator of RNA polymerase II transcription subunit 7a cofactor required for Sp1 transcriptional activation subunit 9 uncharacterized LOC100274258 mediator of RNA polymerase II transcription subunit 7a mediator of RNA polymerase II transcription subunit 7a mediator of RNA polymerase II transcription subunit 7a mediator of RNA polymerase II transcription subunit 7a-like mediator of RNA polymerase II transcription subunit 7b mediator of RNA polymerase II transcription subunit 7a uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 4
ath03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 6
ghi03082 ATP-dependent chromatin remodeling 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 6
bna04141 Protein processing in endoplasmic reticulum 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 8
bna04141 Protein processing in endoplasmic reticulum 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
bna04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 5
cit04136 Autophagy - other 2
cit03040 Spliceosome 2
cit03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00510 N-Glycan biosynthesis 4
zma00513 Various types of N-glycan biosynthesis 4
zma04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 4
sbi03420 Nucleotide excision repair 3
sbi03010 Ribosome 2
sbi04120 Ubiquitin mediated proteolysis 2
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
bdi03420 Nucleotide excision repair 3
bdi04120 Ubiquitin mediated proteolysis 3
bdi04141 Protein processing in endoplasmic reticulum 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 25487810 25497291 100812231 100792250 7469914 831822 831902 103850482 103847399 100257245 107924169 107934559 106372624 106424059 106425283 102624512 101262307 102597158 107770575 107829808 4337290 100282247 100274258 123054812 123046981 123190653 123428035 8082541 100825260 5725791
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