ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
mtr-u.5	25493284	26S proteasome regulatory subunit 8 homolog A
mtr-r.5	25493284	26S proteasome regulatory subunit 8 homolog A
gma-u.5	100776268	26S protease regulatory subunit 8 homolog A-like
gma-u.5	100812783	26S protease regulatory subunit 8 homolog A-like
ppo-u.5	7462629	26S proteasome regulatory subunit 8 homolog A
ppo-u.5	7457846	26S proteasome regulatory subunit 8 homolog A
ath-u.5	RPT6A	regulatory particle triple-A ATPase 6A
ath-u.5	AT5G20000	AAA-type ATPase family protein
bra-r.6	103845704	26S proteasome regulatory subunit 8 homolog A
bra-r.6	103851317	26S proteasome regulatory subunit 8 homolog A
bra-r.6	103856410	26S proteasome regulatory subunit 8 homolog A
vvi-u.5	100254957	26S proteasome regulatory subunit 8 homolog A
vvi-u.5	100254376	26S proteasome regulatory subunit 8 homolog A
ghi-r.1	107901192	26S proteasome regulatory subunit 8 homolog A
ghi-r.1	107907436	26S proteasome regulatory subunit 8 homolog A
ghi-r.1	107932074	26S proteasome regulatory subunit 8 homolog A
bna-r.1	106441534	26S proteasome regulatory subunit 8 homolog A-like
bna-r.1	106439479	26S proteasome regulatory subunit 8 homolog A
bna-r.1	106425811	26S proteasome regulatory subunit 8 homolog A-like
cit-r.1	102610684	26S proteasome regulatory subunit 8 homolog A
sly-u.5	101245359	26S proteasome regulatory subunit 8 homolog A
sly-u.5	101245649	26S proteasome regulatory subunit 8 homolog A
sot-r.1	102596259	26S protease regulatory subunit 8 homolog A
nta-r.1	107831822	26S proteasome regulatory subunit 8 homolog A
nta-r.1	107816419	26S proteasome regulatory subunit 8 homolog A
nta-r.1	107812523	26S proteasome regulatory subunit 8 homolog A
osa-u.5	4328674	26S proteasome regulatory subunit 8 homolog A
osa-u.5	4341448	26S proteasome regulatory subunit 8 homolog A
zma-u.5	100273032	26S protease regulatory subunit 8 homolog B
zma-u.5	100274445	uncharacterized LOC100274445
tae-r.2	123136898	26S proteasome regulatory subunit 8 homolog A
tae-r.2	123127263	26S proteasome regulatory subunit 8 homolog A
tae-r.2	123144346	26S proteasome regulatory subunit 8 homolog A
hvu-r.1	123407310	26S proteasome regulatory subunit 8 homolog A
hvu-r.1	123401343	26S proteasome regulatory subunit 8 homolog A-like
sbi-r.1	8082935	26S protease regulatory subunit 8 homolog A
sbi-r.1	8082246	26S protease regulatory subunit 8 homolog A
sbi-r.1	8061694	26S protease regulatory subunit 8 homolog A
bdi-r.1	100844854	26S proteasome regulatory subunit 8 homolog A
bdi-r.1	100833280	26S proteasome regulatory subunit 8 homolog A
cre-r.1	CHLRE_04g216600v5	uncharacterized protein

Top 50 coexpressed genes to 25493284 (mtr-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 25493284 (mtr-u.5 coexpression data)

CoexMap"25493284"

[Cytoscape]

Annotation

functional annotation

KEGG

mtr03050 [list] [network] Proteasome (60 genes)

GO BP

GO CC

GO MF

GO:0016887 [list] [network] ATP hydrolysis activity	(587 genes)	IEA
GO:0005524 [list] [network] ATP binding	(2502 genes)	IEA

Protein

XP_013457207.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 9, cysk 1

(predict for XP_013457207.1)

Subcellular
localization
TargetP

other 8, chlo 3

(predict for XP_013457207.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	mtr-u.5 for 25493284	mtr-r.5 for 25493284	gma-u.5 for 100776268	gma-u.5 for 100812783	ppo-u.5 for 7462629	ppo-u.5 for 7457846	ath-u.5 for RPT6A	ath-u.5 for AT5G20000	bra-r.6 for 103845704	bra-r.6 for 103851317	bra-r.6 for 103856410	vvi-u.5 for 100254957	vvi-u.5 for 100254376	ghi-r.1 for 107901192	ghi-r.1 for 107907436	ghi-r.1 for 107932074	bna-r.1 for 106441534	bna-r.1 for 106439479	bna-r.1 for 106425811	cit-r.1 for 102610684	sly-u.5 for 101245359	sly-u.5 for 101245649	sot-r.1 for 102596259	nta-r.1 for 107831822	nta-r.1 for 107816419	nta-r.1 for 107812523	osa-u.5 for 4328674	osa-u.5 for 4341448	zma-u.5 for 100273032	zma-u.5 for 100274445	tae-r.2 for 123136898	tae-r.2 for 123127263	tae-r.2 for 123144346	hvu-r.1 for 123407310	hvu-r.1 for 123401343	sbi-r.1 for 8082935	sbi-r.1 for 8082246	sbi-r.1 for 8061694	bdi-r.1 for 100844854	bdi-r.1 for 100833280	cre-r.1 for CHLRE_04g216600v5

Ortholog

Ortholog ID: 3501

Species

mtr

gma

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

RPT6A

Function^*