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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   25494002   probable E3 ubiquitin-protein ligase LUL4 
 mtr-r.5   25494002   probable E3 ubiquitin-protein ligase LUL4 
 mtr-u.5   11423275   probable E3 ubiquitin-protein ligase LOG2 
 mtr-u.5   25484017   probable E3 ubiquitin-protein ligase LOG2 
 mtr-u.5   25486085   probable E3 ubiquitin-protein ligase LUL3 
 gma-u.5   100807343   probable E3 ubiquitin-protein ligase LOG2 
 gma-u.5   100786054   probable E3 ubiquitin-protein ligase LUL4 
 gma-u.5   100808808   probable E3 ubiquitin-protein ligase LUL4 
 ppo-u.5   18098808   probable E3 ubiquitin-protein ligase LUL4 
 ppo-u.5   7486475   probable E3 ubiquitin-protein ligase LOG2 
 ppo-u.5   18100200   probable E3 ubiquitin-protein ligase LOG2 
 ath-u.5   LUL4   RING/U-box superfamily protein 
 ath-u.5   LOG2   RING/U-box superfamily protein 
 ath-u.5   LUL2   RING/U-box superfamily protein 
 vvi-u.5   100266660   probable E3 ubiquitin-protein ligase LUL4 
 vvi-u.5   100852866   probable E3 ubiquitin-protein ligase LUL3 
 vvi-u.5   100250186   probable E3 ubiquitin-protein ligase LOG2 
 sly-u.5   101268819   probable E3 ubiquitin-protein ligase LOG2 
 sly-u.5   101248607   probable E3 ubiquitin-protein ligase LOG2 
 sly-u.5   101247573   probable E3 ubiquitin-protein ligase LOG2 
 osa-u.5   9266835   probable E3 ubiquitin-protein ligase LUL4 
 osa-u.5   4348266   probable E3 ubiquitin-protein ligase LOG2 
 osa-u.5   4332287   probable E3 ubiquitin-protein ligase LOG2 
 zma-u.5   100381407   uncharacterized LOC100381407 
 zma-u.5   103630329   probable E3 ubiquitin-protein ligase LUL3 
 zma-u.5   103633744   probable E3 ubiquitin-protein ligase LUL2 

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Top 50 coexpressed genes to 25494002 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 25494002 (mtr-u.5 coexpression data)

CoexMap"25494002"


mtrLOC25494002 | Entrez gene ID : 25494002      
Species mtr gma ppo ath vvi sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 5 3 3 3 3 3 3 3 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (329 genes)  IEA  
GO CC
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (196 genes)  IEA  
Protein XP_013458165.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  mito 3,  cyto_nucl 3  (predict for XP_013458165.1)
Subcellular
localization
TargetP
mito 6,  other 3  (predict for XP_013458165.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
25494002
mtr-r.5
for
25494002
mtr-u.5
for
11423275
mtr-u.5
for
25484017
mtr-u.5
for
25486085
gma-u.5
for
100807343
gma-u.5
for
100786054
gma-u.5
for
100808808
ppo-u.5
for
18098808
ppo-u.5
for
7486475
ppo-u.5
for
18100200
ath-u.5
for
LUL4
ath-u.5
for
LOG2
ath-u.5
for
LUL2
vvi-u.5
for
100266660
vvi-u.5
for
100852866
vvi-u.5
for
100250186
sly-u.5
for
101268819
sly-u.5
for
101248607
sly-u.5
for
101247573
osa-u.5
for
9266835
osa-u.5
for
4348266
osa-u.5
for
4332287
zma-u.5
for
100381407
zma-u.5
for
103630329
zma-u.5
for
103633744


Ortholog ID: 842
Species mtr mtr gma ppo ppo ath ath bra bra vvi vvi ghi ghi bna bna cit cit sly sly sot sot nta nta osa osa zma zma tae tae hvu hvu sbi sbi bdi bdi cre cre
Symbol LOC25486085 LOC11423275 LOC100789032 LOC7486475 LOC7454248 LUL3 LUL4 LOC103847936 LOC103870520 LOC100260106 LOC100250186 LOC107899650 LOC107948357 LOC106360584 LOC106452764 LOC102631259 LOC102629229 LOC101055522 LOC101268819 LOC102583568 LOC102594177 LOC107792210 LOC107764583 LOC4325441 LOC4348266 LOC109939520 LOC103633744 LOC123085317 LOC123161381 LOC123449124 LOC123442058 LOC8085095 LOC8078837 LOC100829291 LOC100831887 CHLRE_03g145847v5 CHLRE_03g173900v5
Function* probable E3 ubiquitin-protein ligase LUL3 probable E3 ubiquitin-protein ligase LOG2 probable E3 ubiquitin-protein ligase LOG2 probable E3 ubiquitin-protein ligase LOG2 probable E3 ubiquitin-protein ligase LUL4 RING/U-box superfamily protein RING/U-box superfamily protein probable E3 ubiquitin-protein ligase LOG2 probable E3 ubiquitin-protein ligase LOG2 probable E3 ubiquitin-protein ligase LOG2 probable E3 ubiquitin-protein ligase LOG2 probable E3 ubiquitin-protein ligase LOG2 probable E3 ubiquitin-protein ligase LOG2 probable E3 ubiquitin-protein ligase LUL1 probable E3 ubiquitin-protein ligase LOG2 probable E3 ubiquitin-protein ligase LOG2 probable E3 ubiquitin-protein ligase LUL4 Hop-interacting protein THI037 probable E3 ubiquitin-protein ligase LOG2 probable E3 ubiquitin-protein ligase LOG2 probable E3 ubiquitin-protein ligase LOG2 putative E3 ubiquitin-protein ligase LUL4 putative E3 ubiquitin-protein ligase LUL4 probable E3 ubiquitin-protein ligase LUL2 probable E3 ubiquitin-protein ligase LOG2 probable E3 ubiquitin-protein ligase LOG2 probable E3 ubiquitin-protein ligase LUL2 probable E3 ubiquitin-protein ligase LUL2 probable E3 ubiquitin-protein ligase LOG2 probable E3 ubiquitin-protein ligase LUL2 probable E3 ubiquitin-protein ligase LUL4 probable E3 ubiquitin-protein ligase LUL3 probable E3 ubiquitin-protein ligase LUL2 probable E3 ubiquitin-protein ligase LUL4 probable E3 ubiquitin-protein ligase LUL2 uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
mtr04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00100 Steroid biosynthesis 4
gma04141 Protein processing in endoplasmic reticulum 3
gma04144 Endocytosis 2
gma04145 Phagosome 2
gma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00280 Valine, leucine and isoleucine degradation 5
bra00640 Propanoate metabolism 3
bra00410 beta-Alanine metabolism 3
bra01200 Carbon metabolism 3
bra01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03250 Viral life cycle - HIV-1 2
vvi03272 Virion - Hepatitis viruses 2
vvi04144 Endocytosis 2
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04712 Circadian rhythm - plant 3
vvi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00051 Fructose and mannose metabolism 2
cit01250 Biosynthesis of nucleotide sugars 2
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 7
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 3
nta04141 Protein processing in endoplasmic reticulum 2
nta04142 Lysosome 2
nta03250 Viral life cycle - HIV-1 2
nta03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
nta03083 Polycomb repressive complex 2
nta03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 2
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 8
zma04517 IgSF CAM signaling 8
zma05100 Bacterial invasion of epithelial cells 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 5
zma03083 Polycomb repressive complex 2
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 3
hvu01230 Biosynthesis of amino acids 2
hvu00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04626 Plant-pathogen interaction 5
sbi04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 3
sbi04075 Plant hormone signal transduction 2
sbi03250 Viral life cycle - HIV-1 2
sbi03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 25486085 11423275 100789032 7486475 7454248 832027 819787 103847936 103870520 100260106 100250186 107899650 107948357 106360584 106452764 102631259 102629229 101055522 101268819 102583568 102594177 107792210 107764583 4325441 4348266 109939520 103633744 123085317 123161381 123449124 123442058 8085095 8078837 100829291 100831887 66052683 5728890
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