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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   25497707   psbP-like protein 1, chloroplastic 
 mtr-r.5   25497707   psbP-like protein 1, chloroplastic 
 gma-u.5   100789641   psbP-like protein 1, chloroplastic 
 gma-u.5   100305918   psbP-like protein 1, chloroplastic 
 ppo-u.5   7458603   psbP-like protein 1, chloroplastic 
 ath-u.5   PPL1   PsbP-like protein 1 
 vvi-u.5   PSBP2   putative oxygen evolving enhancer protein 
 ghi-r.1   107960084   psbP-like protein 1, chloroplastic 
 ghi-r.1   107904111   psbP-like protein 1, chloroplastic 
 bna-r.1   106445351   psbP-like protein 1, chloroplastic 
 bna-r.1   106396201   psbP-like protein 1, chloroplastic 
 bna-r.1   106367527   psbP-like protein 1, chloroplastic 
 cit-r.1   102629780   psbP-like protein 1, chloroplastic 
 sly-u.5   101259227   psbP-like protein 1, chloroplastic 
 sot-r.1   102585358   psbP-like protein 1, chloroplastic 
 nta-r.1   107786772   psbP-like protein 1, chloroplastic 
 nta-r.1   107774757   psbP-like protein 1, chloroplastic 
 osa-u.5   4345346   psbP-like protein 1, chloroplastic 
 osa-u.5   4348816   uncharacterized LOC4348816 
 osa-u.5   9268431   psbP-like protein 1, chloroplastic 
 zma-u.5   100281199   chloroplast oxygen-evolving complex/thylakoid lumenal 25.6kDa protein 
 tae-r.2   123095571   psbP-like protein 1, chloroplastic 
 tae-r.2   123094128   psbP-like protein 1, chloroplastic 
 hvu-r.1   123446809   psbP-like protein 1, chloroplastic 
 sbi-r.1   8085721   psbP-like protein 1, chloroplastic 
 bdi-r.1   100840391   psbP-like protein 1, chloroplastic 
 cre-r.1   CHLRE_12g509050v5   uncharacterized protein 

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Top 50 coexpressed genes to 25497707 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 25497707 (mtr-u.5 coexpression data)

CoexMap"25497707"


mtrLOC25497707 | Entrez gene ID : 25497707      
Species mtr gma ppo ath vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre bra
Paralog 2 2 1 1 1 2 3 1 1 1 2 3 1 2 1 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG mtr00195 [list] [network] Photosynthesis (100 genes)
GO BP
GO:0015979 [list] [network] photosynthesis  (108 genes)  IEA  
GO CC
GO:0009654 [list] [network] photosystem II oxygen evolving complex  (20 genes)  IEA  
GO:0019898 [list] [network] extrinsic component of membrane  (23 genes)  IEA  
GO:0009523 [list] [network] photosystem II  (37 genes)  IEA  
GO MF
GO:0005509 [list] [network] calcium ion binding  (278 genes)  IEA  
Protein XP_013447861.1 [sequence] [blastp]
XP_013447862.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  mito 3  (predict for XP_013447861.1)
chlo 6,  mito 4  (predict for XP_013447862.1)
Subcellular
localization
TargetP
chlo 8,  mito 4  (predict for XP_013447861.1)
chlo 9,  mito 3  (predict for XP_013447862.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
25497707
mtr-r.5
for
25497707
gma-u.5
for
100789641
gma-u.5
for
100305918
ppo-u.5
for
7458603
ath-u.5
for
PPL1
vvi-u.5
for
PSBP2
ghi-r.1
for
107960084
ghi-r.1
for
107904111
bna-r.1
for
106445351
bna-r.1
for
106396201
bna-r.1
for
106367527
cit-r.1
for
102629780
sly-u.5
for
101259227
sot-r.1
for
102585358
nta-r.1
for
107786772
nta-r.1
for
107774757
osa-u.5
for
4345346
osa-u.5
for
4348816
osa-u.5
for
9268431
zma-u.5
for
100281199
tae-r.2
for
123095571
tae-r.2
for
123094128
hvu-r.1
for
123446809
sbi-r.1
for
8085721
bdi-r.1
for
100840391
cre-r.1
for
CHLRE_12g509050v5


Ortholog ID: 8055
Species mtr gma gma ppo ath vvi ghi ghi bna bna bna cit sly sot nta nta osa osa osa zma tae tae tae hvu sbi bdi cre
Symbol LOC25497707 LOC100789641 LOC100305918 LOC7458603 PPL1 PSBP2 LOC107960084 LOC107904111 LOC106445351 LOC106396201 LOC106367527 LOC102629780 LOC101259227 LOC102585358 LOC107786772 LOC107774757 LOC4345346 LOC4348816 LOC9268431 LOC100281199 LOC123095571 LOC123094128 LOC123087420 LOC123446809 LOC8085721 LOC100840391 CHLRE_12g509050v5
Function* psbP-like protein 1, chloroplastic psbP-like protein 1, chloroplastic psbP-like protein 1, chloroplastic psbP-like protein 1, chloroplastic PsbP-like protein 1 putative oxygen evolving enhancer protein psbP-like protein 1, chloroplastic psbP-like protein 1, chloroplastic psbP-like protein 1, chloroplastic psbP-like protein 1, chloroplastic psbP-like protein 1, chloroplastic psbP-like protein 1, chloroplastic psbP-like protein 1, chloroplastic psbP-like protein 1, chloroplastic psbP-like protein 1, chloroplastic psbP-like protein 1, chloroplastic psbP-like protein 1, chloroplastic uncharacterized LOC4348816 psbP-like protein 1, chloroplastic chloroplast oxygen-evolving complex/thylakoid lumenal 25.6kDa protein psbP-like protein 1, chloroplastic psbP-like protein 1, chloroplastic psbP-like protein 1, chloroplastic psbP-like protein 1, chloroplastic psbP-like protein 1, chloroplastic psbP-like protein 1, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 5
mtr00710 Carbon fixation by Calvin cycle 4
mtr00195 Photosynthesis 4
mtr00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 2
gma00260 Glycine, serine and threonine metabolism 2
gma00630 Glyoxylate and dicarboxylate metabolism 2
gma00670 One carbon pool by folate 2
gma00785 Lipoic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 6
gma00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
gma01240 Biosynthesis of cofactors 2
gma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00710 Carbon fixation by Calvin cycle 6
ppo01200 Carbon metabolism 6
ppo00195 Photosynthesis 4
ppo00010 Glycolysis / Gluconeogenesis 2
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 4
ath00710 Carbon fixation by Calvin cycle 2
ath00260 Glycine, serine and threonine metabolism 2
ath00630 Glyoxylate and dicarboxylate metabolism 2
ath00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00710 Carbon fixation by Calvin cycle 3
vvi01200 Carbon metabolism 3
vvi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00030 Pentose phosphate pathway 2
ghi00051 Fructose and mannose metabolism 2
ghi00710 Carbon fixation by Calvin cycle 2
ghi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 3
cit00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 3
sly00710 Carbon fixation by Calvin cycle 2
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 7
sot01200 Carbon metabolism 4
sot00710 Carbon fixation by Calvin cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 9
nta00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 6
nta00195 Photosynthesis 2
nta00620 Pyruvate metabolism 2
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 4
osa00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00196 Photosynthesis - antenna proteins 3
tae00195 Photosynthesis 3
tae01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00740 Riboflavin metabolism 3
tae01240 Biosynthesis of cofactors 3
tae00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 4
tae00196 Photosynthesis - antenna proteins 2
tae00740 Riboflavin metabolism 2
tae00790 Folate biosynthesis 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 7
hvu00710 Carbon fixation by Calvin cycle 4
hvu00195 Photosynthesis 4
hvu00630 Glyoxylate and dicarboxylate metabolism 4
hvu00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00630 Glyoxylate and dicarboxylate metabolism 7
bdi01200 Carbon metabolism 7
bdi00710 Carbon fixation by Calvin cycle 5
bdi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00195 Photosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 25497707 100789641 100305918 7458603 824699 100259776 107960084 107904111 106445351 106396201 106367527 102629780 101259227 102585358 107786772 107774757 4345346 4348816 9268431 100281199 123095571 123094128 123087420 123446809 8085721 100840391 5716532
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