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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   25499557   protein WHAT'S THIS FACTOR 9, mitochondrial 
 mtr-r.5   25499557   protein WHAT'S THIS FACTOR 9, mitochondrial 
 gma-u.5   100808403   protein WHAT'S THIS FACTOR 9, mitochondrial 
 gma-u.5   100801315   protein WHAT'S THIS FACTOR 9, mitochondrial 
 ppo-u.5   7455626   protein WHAT'S THIS FACTOR 9, mitochondrial 
 ath-u.5   AT3G58520   Ubiquitin carboxyl-terminal hydrolase family protein 
 vvi-u.5   100255516   protein WHAT'S THIS FACTOR 9, mitochondrial 
 sly-u.5   101251628   protein WHAT'S THIS FACTOR 9, mitochondrial 
 osa-u.5   4336567   protein WHAT'S THIS FACTOR 9, mitochondrial 
 zma-u.5   100383051   Ubiquitin carboxyl-terminal hydrolase family protein 

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Top 50 coexpressed genes to 25499557 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 25499557 (mtr-u.5 coexpression data)

CoexMap"25499557"


mtrLOC25499557 | Entrez gene ID : 25499557      
Species mtr gma ppo ath vvi sly osa zma tae hvu ghi bdi cit bra cre sbi bna nta sot
Paralog 2 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1400 genes)  IEA  
Protein XP_024625726.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  pero 2,  nucl 1,  mito 1,  extr 1,  cyto_nucl 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_024625726.1)
Subcellular
localization
TargetP
mito 5,  other 3  (predict for XP_024625726.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
25499557

.
mtr-r.5
for
25499557

.
gma-u.5
for
100808403

.
gma-u.5
for
100801315

.
ppo-u.5
for
7455626

.
ath-u.5
for
AT3G58520

.
vvi-u.5
for
100255516

.
sly-u.5
for
101251628

.
osa-u.5
for
4336567

.
zma-u.5
for
100383051

.


Ortholog ID: 10830
Species ath gma gma sly osa zma bra vvi ppo mtr tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT3G58520 LOC100801315 LOC100808403 LOC101251628 LOC4336567 LOC100383051 LOC103841730 LOC100255516 LOC7455626 LOC25499557 LOC123046213 LOC123427413 LOC107957556 LOC107904936 LOC106403215 LOC106368147 LOC8055952 LOC102586506 LOC102613721 LOC100843536 LOC107796026 LOC107794593
Function* Ubiquitin carboxyl-terminal hydrolase family protein protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 9, mitochondrial Ubiquitin carboxyl-terminal hydrolase family protein protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 9, mitochondrial-like protein WHAT'S THIS FACTOR 9, mitochondrial-like protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 1 protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 9, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 9
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 5
tae03022 Basal transcription factors 2
tae03420 Nucleotide excision repair 2
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 3
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
nta03015 mRNA surveillance pathway 2
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta00730 Thiamine metabolism 2
nta00900 Terpenoid backbone biosynthesis 2
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 825021 100801315 100808403 101251628 4336567 100383051 103841730 100255516 7455626 25499557 123046213 123427413 107957556 107904936 106403215 106368147 8055952 102586506 102613721 100843536 107796026 107794593
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