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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   25501829   E3 ubiquitin-protein ligase RGLG5 
 mtr-r.5   25501829   E3 ubiquitin-protein ligase RGLG5 
 mtr-u.5   11422178   E3 ubiquitin-protein ligase RGLG5 
 mtr-u.5   11408827   E3 ubiquitin-protein ligase RGLG2 
 mtr-u.5   11435543   E3 ubiquitin-protein ligase RGLG2 
 gma-u.5   100787033   E3 ubiquitin-protein ligase RGLG2 
 gma-u.5   100819098   E3 ubiquitin-protein ligase RGLG2 
 gma-u.5   100809850   E3 ubiquitin-protein ligase RGLG2-like 
 ppo-u.5   7473198   E3 ubiquitin-protein ligase RGLG5 
 ppo-u.5   7484434   E3 ubiquitin-protein ligase RGLG2 
 ath-u.5   RGLG1   RING domain ligase1 
 ath-u.5   RGLG2   RING domain ligase2 
 ath-u.5   AT1G67800   Copine (Calcium-dependent phospholipid-binding protein) family 
 vvi-u.5   100251913   E3 ubiquitin-protein ligase RGLG2 
 vvi-u.5   100267987   E3 ubiquitin-protein ligase RGLG2 
 vvi-u.5   100255057   E3 ubiquitin-protein ligase RGLG2 
 sly-u.5   RFP1   E3 ubiquitin-protein ligase RGLG2-like 
 sly-u.5   101249812   E3 ubiquitin-protein ligase RGLG2 
 osa-u.5   4341497   E3 ubiquitin-protein ligase RGLG2 
 osa-u.5   4352002   E3 ubiquitin-protein ligase RGLG2 
 osa-u.5   4324990   E3 ubiquitin-protein ligase RGLG2 
 zma-u.5   100281056   copine-1 
 zma-u.5   100279782   E3 ubiquitin-protein ligase RGLG1 
 zma-u.5   103631276   E3 ubiquitin-protein ligase RGLG2 

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Top 50 coexpressed genes to 25501829 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 25501829 (mtr-u.5 coexpression data)

CoexMap"25501829"


mtrLOC25501829 | Entrez gene ID : 25501829      
Species mtr gma ppo ath vvi sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 5 3 2 3 3 2 3 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (329 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2707 genes)  IEA  
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (358 genes)  IEA  
Protein XP_013446716.1 [sequence] [blastp]
Subcellular
localization
wolf
extr 3,  vacu 2,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_013446716.1)
Subcellular
localization
TargetP
scret 6  (predict for XP_013446716.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
25501829
mtr-r.5
for
25501829
mtr-u.5
for
11422178
mtr-u.5
for
11408827
mtr-u.5
for
11435543
gma-u.5
for
100787033
gma-u.5
for
100819098
gma-u.5
for
100809850
ppo-u.5
for
7473198
ppo-u.5
for
7484434
ath-u.5
for
RGLG1
ath-u.5
for
RGLG2
ath-u.5
for
AT1G67800
vvi-u.5
for
100251913
vvi-u.5
for
100267987
vvi-u.5
for
100255057
sly-u.5
for
RFP1
sly-u.5
for
101249812
osa-u.5
for
4341497
osa-u.5
for
4352002
osa-u.5
for
4324990
zma-u.5
for
100281056
zma-u.5
for
100279782
zma-u.5
for
103631276


Ortholog ID: 954
Species mtr mtr gma gma ppo ppo ath ath bra bra vvi vvi ghi ghi bna cit cit sly sly sot sot nta nta osa zma zma tae hvu hvu sbi sbi bdi bdi cre cre
Symbol LOC11435543 LOC25489533 LOC100790800 LOC100799565 LOC7484434 LOC7473198 RGLG2 AT1G67800 LOC103870996 LOC103846485 LOC100251913 LOC100255057 LOC107892243 LOC121224251 LOC106353976 LOC102630950 LOC102623356 LOC101249812 RFP1 LOC102595336 LOC102585646 LOC107793203 LOC107799607 LOC4352002 LOC103631276 LOC100279516 LOC123157038 LOC123411523 LOC123411526 LOC110431341 LOC8078706 LOC100830231 LOC100833247 CHLRE_09g399550v5 CHLRE_09g399915v5
Function* E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG5 RING domain ligase2 Copine (Calcium-dependent phospholipid-binding protein) family E3 ubiquitin-protein ligase RGLG1 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG5 E3 ubiquitin-protein ligase RGLG2-like E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2-like E3 ubiquitin-protein ligase RGLG2-like E3 ubiquitin-protein ligase RGLG2-like E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2-like E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2 uncharacterized LOC100279516 E3 ubiquitin-protein ligase RGLG5 E3 ubiquitin-protein ligase RGLG3-like E3 ubiquitin-protein ligase RGLG5-like E3 ubiquitin-protein ligase RGLG2-like E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG3 uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 5
ppo03010 Ribosome 2
ppo03060 Protein export 2
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00520 Amino sugar and nucleotide sugar metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03420 Nucleotide excision repair 2
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 3
bna04120 Ubiquitin mediated proteolysis 3
bna04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 3
cit00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 3
sly04144 Endocytosis 2
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 12
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 3
zma04148 Efferocytosis 2
zma03250 Viral life cycle - HIV-1 2
zma03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00100 Steroid biosynthesis 3
tae00561 Glycerolipid metabolism 3
tae00564 Glycerophospholipid metabolism 3
tae00565 Ether lipid metabolism 3
tae00590 Arachidonic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04146 Peroxisome 2
sbi00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 4
sbi04626 Plant-pathogen interaction 3
sbi04016 MAPK signaling pathway - plant 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 11435543 25489533 100790800 100799565 7484434 7473198 831293 843106 103870996 103846485 100251913 100255057 107892243 121224251 106353976 102630950 102623356 101249812 101258318 102595336 102585646 107793203 107799607 4352002 103631276 100279516 123157038 123411523 123411526 110431341 8078706 100830231 100833247 5720678 66054764
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