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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   103631276   E3 ubiquitin-protein ligase RGLG2 
 zma-r.6   103631276   E3 ubiquitin-protein ligase RGLG2 
 zma-u.5   100279782   E3 ubiquitin-protein ligase RGLG1 
 zma-u.5   100281056   copine-1 
 zma-u.5   100279516   uncharacterized LOC100279516 
 sbi-r.1   8078706   E3 ubiquitin-protein ligase RGLG2 
 sbi-r.1   110431341   E3 ubiquitin-protein ligase RGLG2-like 
 osa-u.5   4341497   E3 ubiquitin-protein ligase RGLG2 
 osa-u.5   4352002   E3 ubiquitin-protein ligase RGLG2 
 tae-r.2   123062990   E3 ubiquitin-protein ligase RGLG2 
 tae-r.2   123080185   E3 ubiquitin-protein ligase RGLG2 
 tae-r.2   123148237   E3 ubiquitin-protein ligase RGLG5 
 hvu-r.1   123411523   E3 ubiquitin-protein ligase RGLG3-like 
 hvu-r.1   123411526   E3 ubiquitin-protein ligase RGLG5-like 
 bdi-r.1   100833247   E3 ubiquitin-protein ligase RGLG3 
 bdi-r.1   100830231   E3 ubiquitin-protein ligase RGLG2 
 bdi-r.1   100830193   E3 ubiquitin-protein ligase RGLG2 
 ath-u.5   RGLG1   RING domain ligase1 
 ath-u.5   RGLG2   RING domain ligase2 
 ath-u.5   AT1G67800   Copine (Calcium-dependent phospholipid-binding protein) family 
 gma-u.5   100820356   E3 ubiquitin-protein ligase RGLG5 
 gma-u.5   100809850   E3 ubiquitin-protein ligase RGLG2-like 
 gma-u.5   100800161   E3 ubiquitin-protein ligase RGLG5 
 sly-u.5   101249812   E3 ubiquitin-protein ligase RGLG2 
 sly-u.5   RFP1   E3 ubiquitin-protein ligase RGLG2-like 
 bra-r.6   103846485   E3 ubiquitin-protein ligase RGLG2 
 bra-r.6   103839072   E3 ubiquitin-protein ligase RGLG5 
 vvi-u.5   100247388   E3 ubiquitin-protein ligase RGLG2 
 vvi-u.5   100251913   E3 ubiquitin-protein ligase RGLG2 
 vvi-u.5   100255057   E3 ubiquitin-protein ligase RGLG2 
 ppo-u.5   7453812   E3 ubiquitin-protein ligase RGLG2 
 mtr-u.5   25489533   E3 ubiquitin-protein ligase RGLG2 
 mtr-u.5   11422178   E3 ubiquitin-protein ligase RGLG5 
 mtr-u.5   25501829   E3 ubiquitin-protein ligase RGLG5 
 ghi-r.1   107959911   E3 ubiquitin-protein ligase RGLG2 
 ghi-r.1   107946581   E3 ubiquitin-protein ligase RGLG2 
 ghi-r.1   107926092   E3 ubiquitin-protein ligase RGLG2 
 bna-r.1   106416541   E3 ubiquitin-protein ligase RGLG2 
 bna-r.1   106367219   E3 ubiquitin-protein ligase RGLG2 
 bna-r.1   106353976   E3 ubiquitin-protein ligase RGLG5 
 sot-r.1   102585646   E3 ubiquitin-protein ligase RGLG2-like 
 sot-r.1   102595336   E3 ubiquitin-protein ligase RGLG2-like 
 cit-r.1   102623356   E3 ubiquitin-protein ligase RGLG2 
 cit-r.1   102630950   E3 ubiquitin-protein ligase RGLG2-like 
 cit-r.1   102608772   E3 ubiquitin-protein ligase RGLG2 
 nta-r.1   107799607   E3 ubiquitin-protein ligase RGLG2-like 
 nta-r.1   107784766   E3 ubiquitin-protein ligase RGLG2 
 nta-r.1   107793203   E3 ubiquitin-protein ligase RGLG2 
 cre-r.1   CHLRE_09g399915v5   uncharacterized protein 
 cre-r.1   CHLRE_09g399550v5   uncharacterized protein 

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Top 50 coexpressed genes to 103631276 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103631276 (zma-u.5 coexpression data)

CoexMap"103631276"


zmaLOC103631276 | Entrez gene ID : 103631276    
Species zma sbi osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 5 2 2 3 2 3 3 3 2 2 3 1 3 3 3 2 3 3 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (391 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (3371 genes)  IEA  
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (430 genes)  IEA  
Protein XP_020394968.1 [sequence] [blastp]
XP_020394969.1 [sequence] [blastp]
XP_020394970.1 [sequence] [blastp]
XP_020394971.1 [sequence] [blastp]
XP_020394972.1 [sequence] [blastp]
XP_020394973.1 [sequence] [blastp]
XP_020394974.1 [sequence] [blastp]
XP_035816003.1 [sequence] [blastp]
XP_035816004.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 1,  mito 1,  extr 1,  vacu 1,  pero 1  (predict for XP_020394968.1)
nucl 6,  chlo 1,  mito 1,  extr 1,  vacu 1,  pero 1  (predict for XP_020394969.1)
nucl 6,  chlo 1,  mito 1,  extr 1,  vacu 1,  pero 1  (predict for XP_020394970.1)
nucl 6,  chlo 1,  mito 1,  extr 1,  vacu 1,  pero 1  (predict for XP_020394971.1)
chlo 5,  nucl 3,  chlo_mito 3  (predict for XP_020394972.1)
chlo 5,  nucl 3,  chlo_mito 3  (predict for XP_020394973.1)
chlo 5,  nucl 3,  chlo_mito 3  (predict for XP_020394974.1)
nucl 6,  chlo 1,  mito 1,  extr 1,  vacu 1,  pero 1  (predict for XP_035816003.1)
chlo 5,  nucl 3,  chlo_mito 3  (predict for XP_035816004.1)
Subcellular
localization
TargetP
other 5  (predict for XP_020394968.1)
other 5  (predict for XP_020394969.1)
other 5  (predict for XP_020394970.1)
other 5  (predict for XP_020394971.1)
other 5  (predict for XP_020394972.1)
other 5  (predict for XP_020394973.1)
other 5  (predict for XP_020394974.1)
other 5  (predict for XP_035816003.1)
other 5  (predict for XP_035816004.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
103631276
zma-r.6
for
103631276
zma-u.5
for
100279782
zma-u.5
for
100281056
zma-u.5
for
100279516
sbi-r.1
for
8078706
sbi-r.1
for
110431341
osa-u.5
for
4341497
osa-u.5
for
4352002
tae-r.2
for
123062990
tae-r.2
for
123080185
tae-r.2
for
123148237
hvu-r.1
for
123411523
hvu-r.1
for
123411526
bdi-r.1
for
100833247
bdi-r.1
for
100830231
bdi-r.1
for
100830193
ath-u.5
for
RGLG1
ath-u.5
for
RGLG2
ath-u.5
for
AT1G67800
gma-u.5
for
100820356
gma-u.5
for
100809850
gma-u.5
for
100800161
sly-u.5
for
101249812
sly-u.5
for
RFP1
bra-r.6
for
103846485
bra-r.6
for
103839072
vvi-u.5
for
100247388
vvi-u.5
for
100251913
vvi-u.5
for
100255057
ppo-u.5
for
7453812
mtr-u.5
for
25489533
mtr-u.5
for
11422178
mtr-u.5
for
25501829
ghi-r.1
for
107959911
ghi-r.1
for
107946581
ghi-r.1
for
107926092
bna-r.1
for
106416541
bna-r.1
for
106367219
bna-r.1
for
106353976
sot-r.1
for
102585646
sot-r.1
for
102595336
cit-r.1
for
102623356
cit-r.1
for
102630950
cit-r.1
for
102608772
nta-r.1
for
107799607
nta-r.1
for
107784766
nta-r.1
for
107793203
cre-r.1
for
CHLRE_09g399915v5
cre-r.1
for
CHLRE_09g399550v5


Ortholog ID: 954
Species zma zma zma sbi sbi osa osa tae tae hvu hvu bdi bdi bdi ath ath ath gma gma gma sly sly bra bra bra vvi vvi vvi ppo ppo ppo mtr mtr mtr ghi ghi ghi bna bna sot sot cit cit cit nta nta nta cre cre
Symbol LOC103631276 LOC100281056 LOC100279516 LOC8078706 LOC110431341 LOC4352002 LOC4324990 LOC123157038 LOC543024 LOC123411523 LOC123411526 LOC100833247 LOC100830231 LOC100830193 RGLG1 RGLG2 AT1G67800 LOC100799565 LOC100787033 LOC100790800 LOC101249812 RFP1 LOC103846485 LOC103839072 LOC103870996 LOC100247388 LOC100251913 LOC100255057 LOC7453812 LOC7484434 LOC7473198 LOC25489533 LOC25501829 LOC11435543 LOC107926092 LOC107892243 LOC121224251 LOC106353976 LOC106406458 LOC102585646 LOC102595336 LOC102623356 LOC102630950 LOC102608772 LOC107799607 LOC107793203 LOC107827774 CHLRE_09g399915v5 CHLRE_09g399550v5
Function* E3 ubiquitin-protein ligase RGLG2 copine-1 uncharacterized LOC100279516 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2-like E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG5 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG3-like E3 ubiquitin-protein ligase RGLG5-like E3 ubiquitin-protein ligase RGLG3 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2 RING domain ligase1 RING domain ligase2 Copine (Calcium-dependent phospholipid-binding protein) family E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2-like E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG5 E3 ubiquitin-protein ligase RGLG1 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG5 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG5 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG5 E3 ubiquitin-protein ligase RGLG5 E3 ubiquitin-protein ligase RGLG2-like E3 ubiquitin-protein ligase RGLG2-like E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2-like E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2-like E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG1-like uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 3
zma04148 Efferocytosis 2
zma03250 Viral life cycle - HIV-1 2
zma03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 6
zma04148 Efferocytosis 3
zma03250 Viral life cycle - HIV-1 3
zma03272 Virion - Hepatitis viruses 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 4
sbi04626 Plant-pathogen interaction 3
sbi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04146 Peroxisome 2
sbi00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04626 Plant-pathogen interaction 3
osa04016 MAPK signaling pathway - plant 2
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00100 Steroid biosynthesis 3
tae00561 Glycerolipid metabolism 3
tae00564 Glycerophospholipid metabolism 3
tae00565 Ether lipid metabolism 3
tae00590 Arachidonic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00460 Cyanoamino acid metabolism 2
tae00500 Starch and sucrose metabolism 2
tae00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
bdi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 3
sly04144 Endocytosis 2
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01230 Biosynthesis of amino acids 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00520 Amino sugar and nucleotide sugar metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 5
ppo03010 Ribosome 2
ppo03060 Protein export 2
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00600 Sphingolipid metabolism 2
ghi04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03420 Nucleotide excision repair 2
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 3
bna04120 Ubiquitin mediated proteolysis 3
bna04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 2
bna04120 Ubiquitin mediated proteolysis 2
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 12
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 3
cit00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 2
cit03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04130 SNARE interactions in vesicular transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103631276 100281056 100279516 8078706 110431341 4352002 4324990 123157038 543024 123411523 123411526 100833247 100830231 100830193 819911 831293 843106 100799565 100787033 100790800 101249812 101258318 103846485 103839072 103870996 100247388 100251913 100255057 7453812 7484434 7473198 25489533 25501829 11435543 107926092 107892243 121224251 106353976 106406458 102585646 102595336 102623356 102630950 102608772 107799607 107793203 107827774 66054764 5720678
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