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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103846485   E3 ubiquitin-protein ligase RGLG2 
 bra-r.6   103839072   E3 ubiquitin-protein ligase RGLG5 
 bra-r.6   103831205   E3 ubiquitin-protein ligase RGLG5 
 bna-r.1   106416541   E3 ubiquitin-protein ligase RGLG2 
 bna-r.1   106367219   E3 ubiquitin-protein ligase RGLG2 
 bna-r.1   106353976   E3 ubiquitin-protein ligase RGLG5 
 ath-u.5   RGLG1   RING domain ligase1 
 ath-u.5   RGLG2   RING domain ligase2 
 ath-u.5   AT1G67800   Copine (Calcium-dependent phospholipid-binding protein) family 
 ghi-r.1   107959911   E3 ubiquitin-protein ligase RGLG2 
 ghi-r.1   107946581   E3 ubiquitin-protein ligase RGLG2 
 ghi-r.1   107926092   E3 ubiquitin-protein ligase RGLG2 
 cit-r.1   102623356   E3 ubiquitin-protein ligase RGLG2 
 cit-r.1   102630950   E3 ubiquitin-protein ligase RGLG2-like 
 cit-r.1   102608772   E3 ubiquitin-protein ligase RGLG2 
 gma-u.5   100819098   E3 ubiquitin-protein ligase RGLG2 
 gma-u.5   100800161   E3 ubiquitin-protein ligase RGLG5 
 gma-u.5   100799565   E3 ubiquitin-protein ligase RGLG2 
 vvi-u.5   100247388   E3 ubiquitin-protein ligase RGLG2 
 vvi-u.5   100255057   E3 ubiquitin-protein ligase RGLG2 
 vvi-u.5   100251913   E3 ubiquitin-protein ligase RGLG2 
 ppo-u.5   7473198   E3 ubiquitin-protein ligase RGLG5 
 ppo-u.5   7453812   E3 ubiquitin-protein ligase RGLG2 
 mtr-u.5   25501829   E3 ubiquitin-protein ligase RGLG5 
 mtr-u.5   11422178   E3 ubiquitin-protein ligase RGLG5 
 mtr-u.5   11408827   E3 ubiquitin-protein ligase RGLG2 
 sly-u.5   RFP1   E3 ubiquitin-protein ligase RGLG2-like 
 sly-u.5   101249812   E3 ubiquitin-protein ligase RGLG2 
 sot-r.1   102585646   E3 ubiquitin-protein ligase RGLG2-like 
 sot-r.1   102595336   E3 ubiquitin-protein ligase RGLG2-like 
 nta-r.1   107799607   E3 ubiquitin-protein ligase RGLG2-like 
 nta-r.1   107784766   E3 ubiquitin-protein ligase RGLG2 
 nta-r.1   107793203   E3 ubiquitin-protein ligase RGLG2 
 osa-u.5   4341497   E3 ubiquitin-protein ligase RGLG2 
 osa-u.5   4324990   E3 ubiquitin-protein ligase RGLG2 
 zma-u.5   100279516   uncharacterized LOC100279516 
 zma-u.5   103631276   E3 ubiquitin-protein ligase RGLG2 
 zma-u.5   100281056   copine-1 
 tae-r.2   123062990   E3 ubiquitin-protein ligase RGLG2 
 tae-r.2   123080185   E3 ubiquitin-protein ligase RGLG2 
 tae-r.2   123148237   E3 ubiquitin-protein ligase RGLG5 
 hvu-r.1   123411523   E3 ubiquitin-protein ligase RGLG3-like 
 hvu-r.1   123411526   E3 ubiquitin-protein ligase RGLG5-like 
 sbi-r.1   8078706   E3 ubiquitin-protein ligase RGLG2 
 sbi-r.1   110431341   E3 ubiquitin-protein ligase RGLG2-like 
 bdi-r.1   100833247   E3 ubiquitin-protein ligase RGLG3 
 bdi-r.1   100830231   E3 ubiquitin-protein ligase RGLG2 
 bdi-r.1   100830193   E3 ubiquitin-protein ligase RGLG2 
 cre-r.1   CHLRE_09g399915v5   uncharacterized protein 
 cre-r.1   CHLRE_09g399550v5   uncharacterized protein 

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Top 50 coexpressed genes to 103846485 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103846485 (bra-r.6 coexpression data)

CoexMap"103846485"


braLOC103846485 | Entrez gene ID : 103846485    
Species bra bna ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 3 3 3 3 3 3 2 3 2 2 3 2 3 3 2 2 3 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0070534 [list] [network] protein K63-linked ubiquitination  (17 genes)  IEA  
GO CC
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (295 genes)  IEA  
Protein XP_009121662.1 [sequence] [blastp]
XP_009121663.1 [sequence] [blastp]
XP_009121664.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  cyto 1  (predict for XP_009121662.1)
nucl 8,  cyto 1  (predict for XP_009121663.1)
nucl 8,  cyto 1  (predict for XP_009121664.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_009121662.1)
chlo 7  (predict for XP_009121663.1)
chlo 7  (predict for XP_009121664.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103846485
bra-r.6
for
103839072
bra-r.6
for
103831205
bna-r.1
for
106416541
bna-r.1
for
106367219
bna-r.1
for
106353976
ath-u.5
for
RGLG1
ath-u.5
for
RGLG2
ath-u.5
for
AT1G67800
ghi-r.1
for
107959911
ghi-r.1
for
107946581
ghi-r.1
for
107926092
cit-r.1
for
102623356
cit-r.1
for
102630950
cit-r.1
for
102608772
gma-u.5
for
100819098
gma-u.5
for
100800161
gma-u.5
for
100799565
vvi-u.5
for
100247388
vvi-u.5
for
100255057
vvi-u.5
for
100251913
ppo-u.5
for
7473198
ppo-u.5
for
7453812
mtr-u.5
for
25501829
mtr-u.5
for
11422178
mtr-u.5
for
11408827
sly-u.5
for
RFP1
sly-u.5
for
101249812
sot-r.1
for
102585646
sot-r.1
for
102595336
nta-r.1
for
107799607
nta-r.1
for
107784766
nta-r.1
for
107793203
osa-u.5
for
4341497
osa-u.5
for
4324990
zma-u.5
for
100279516
zma-u.5
for
103631276
zma-u.5
for
100281056
tae-r.2
for
123062990
tae-r.2
for
123080185
tae-r.2
for
123148237
hvu-r.1
for
123411523
hvu-r.1
for
123411526
sbi-r.1
for
8078706
sbi-r.1
for
110431341
bdi-r.1
for
100833247
bdi-r.1
for
100830231
bdi-r.1
for
100830193
cre-r.1
for
CHLRE_09g399915v5
cre-r.1
for
CHLRE_09g399550v5


Ortholog ID: 954
Species bra bra bra bna bna ath ath ath ghi ghi ghi cit cit cit gma gma gma vvi vvi vvi ppo ppo ppo mtr mtr mtr sly sly sot sot nta nta nta osa osa zma zma zma tae tae hvu hvu sbi sbi bdi bdi bdi cre cre
Symbol LOC103846485 LOC103839072 LOC103870996 LOC106353976 LOC106406458 RGLG1 RGLG2 AT1G67800 LOC107926092 LOC107892243 LOC121224251 LOC102623356 LOC102630950 LOC102608772 LOC100799565 LOC100790800 LOC100787033 LOC100247388 LOC100255057 LOC100251913 LOC7473198 LOC7453812 LOC7484434 LOC25501829 LOC11435543 LOC25489533 RFP1 LOC101249812 LOC102585646 LOC102595336 LOC107799607 LOC107793203 LOC107827774 LOC4324990 LOC4352002 LOC100279516 LOC103631276 LOC100281056 LOC123157038 LOC543024 LOC123411523 LOC123411526 LOC8078706 LOC110431341 LOC100833247 LOC100830231 LOC100830193 CHLRE_09g399915v5 CHLRE_09g399550v5
Function* E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG5 E3 ubiquitin-protein ligase RGLG1 E3 ubiquitin-protein ligase RGLG5 E3 ubiquitin-protein ligase RGLG5 RING domain ligase1 RING domain ligase2 Copine (Calcium-dependent phospholipid-binding protein) family E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2-like E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG5 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG5 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2-like E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2-like E3 ubiquitin-protein ligase RGLG2-like E3 ubiquitin-protein ligase RGLG2-like E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG1-like E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2 uncharacterized LOC100279516 E3 ubiquitin-protein ligase RGLG2 copine-1 E3 ubiquitin-protein ligase RGLG5 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG3-like E3 ubiquitin-protein ligase RGLG5-like E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2-like E3 ubiquitin-protein ligase RGLG3 E3 ubiquitin-protein ligase RGLG2 E3 ubiquitin-protein ligase RGLG2 uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01230 Biosynthesis of amino acids 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 3
bna04120 Ubiquitin mediated proteolysis 3
bna04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 2
bna04120 Ubiquitin mediated proteolysis 2
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00600 Sphingolipid metabolism 2
ghi04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03420 Nucleotide excision repair 2
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 3
cit00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 2
cit03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00520 Amino sugar and nucleotide sugar metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 5
ppo03010 Ribosome 2
ppo03060 Protein export 2
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 3
sly04144 Endocytosis 2
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 12
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04626 Plant-pathogen interaction 3
osa04016 MAPK signaling pathway - plant 2
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 3
zma04148 Efferocytosis 2
zma03250 Viral life cycle - HIV-1 2
zma03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 6
zma04148 Efferocytosis 3
zma03250 Viral life cycle - HIV-1 3
zma03272 Virion - Hepatitis viruses 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00100 Steroid biosynthesis 3
tae00561 Glycerolipid metabolism 3
tae00564 Glycerophospholipid metabolism 3
tae00565 Ether lipid metabolism 3
tae00590 Arachidonic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00460 Cyanoamino acid metabolism 2
tae00500 Starch and sucrose metabolism 2
tae00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 4
sbi04626 Plant-pathogen interaction 3
sbi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04146 Peroxisome 2
sbi00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
bdi04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103846485 103839072 103870996 106353976 106406458 819911 831293 843106 107926092 107892243 121224251 102623356 102630950 102608772 100799565 100790800 100787033 100247388 100255057 100251913 7473198 7453812 7484434 25501829 11435543 25489533 101258318 101249812 102585646 102595336 107799607 107793203 107827774 4324990 4352002 100279516 103631276 100281056 123157038 543024 123411523 123411526 8078706 110431341 100833247 100830231 100830193 66054764 5720678
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