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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT1G10417   RUN/FYVE domain protein 
 ath-m.4.bio   AT1G10417   RUN/FYVE domain protein 
 ath-m.4.hor   AT1G10417   RUN/FYVE domain protein 
 ath-m.4.lig   AT1G10417   RUN/FYVE domain protein 
 ath-m.4.str   AT1G10417   RUN/FYVE domain protein 
 ath-m.4.tis   AT1G10417   RUN/FYVE domain protein 
 bra-r.6   103871812   tropomyosin-1 
 ghi-r.1   107903680   fibrinogen- and Ig-binding protein 
 ghi-r.1   107959953   protein CROWDED NUCLEI 2 
 cit-r.1   102625277   uncharacterized LOC102625277 
 vvi-u.5   100855041   uncharacterized LOC100855041 
 mtr-u.5   11412241   chromosome partition protein Smc 
 nta-r.1   107770020   uncharacterized LOC107770020 
 nta-r.1   107799361   uncharacterized LOC107799361 
 osa-u.5   9267764   uncharacterized LOC9267764 
 zma-u.5   100274351   uncharacterized LOC100274351 
 tae-r.2   123151636   myosin-10 
 tae-r.2   123160331   plectin 
 tae-r.2   123167553   plectin 
 hvu-r.1   123411550   putative protein tag-278 
 sbi-r.1   8062263   coiled-coil domain-containing protein 57 
 bdi-r.1   100831746   uncharacterized LOC100831746 

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Top 50 coexpressed genes to AT1G10417 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G10417 (ath-m.9 coexpression data)

CoexMap"3766692"


athAT1G10417 | Entrez gene ID : 3766692      
Species ath bra ghi cit vvi mtr nta osa zma tae hvu sbi bdi gma sot sly bna ppo cre
Paralog 6 1 2 1 1 1 2 1 1 3 1 1 1 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
Protein NP_001031019.4 [sequence] [blastp]
NP_001322063.1 [sequence] [blastp]
NP_001322064.1 [sequence] [blastp]
NP_001322065.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 2,  E.R. 1  (predict for NP_001031019.4)
nucl 5,  cyto_nucl 4,  cyto 2,  chlo 1  (predict for NP_001322063.1)
nucl 7,  cyto 1,  E.R. 1,  cyto_E.R. 1  (predict for NP_001322064.1)
cyto 5,  nucl 4  (predict for NP_001322065.1)
Subcellular
localization
TargetP
mito 6,  other 5  (predict for NP_001031019.4)
chlo 7  (predict for NP_001322063.1)
mito 6,  other 5  (predict for NP_001322064.1)
other 5,  mito 3  (predict for NP_001322065.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT1G10417
ath-m.4.bio
for
AT1G10417
ath-m.4.hor
for
AT1G10417
ath-m.4.lig
for
AT1G10417
ath-m.4.str
for
AT1G10417
ath-m.4.tis
for
AT1G10417
bra-r.6
for
103871812
ghi-r.1
for
107903680
ghi-r.1
for
107959953
cit-r.1
for
102625277
vvi-u.5
for
100855041
mtr-u.5
for
11412241
nta-r.1
for
107770020
nta-r.1
for
107799361
osa-u.5
for
9267764
zma-u.5
for
100274351
tae-r.2
for
123151636
tae-r.2
for
123160331
tae-r.2
for
123167553
hvu-r.1
for
123411550
sbi-r.1
for
8062263
bdi-r.1
for
100831746


Ortholog ID: 11822
Species bra ghi ghi cit vvi mtr nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC103871812 LOC107903680 LOC107959953 LOC102625277 LOC100855041 LOC11412241 LOC107770020 LOC107799361 LOC9267764 LOC100274351 LOC123151636 LOC123160331 LOC123167553 LOC123411550 LOC8062263 LOC100831746
Function* tropomyosin-1 fibrinogen- and Ig-binding protein protein CROWDED NUCLEI 2 uncharacterized LOC102625277 uncharacterized LOC100855041 chromosome partition protein Smc uncharacterized LOC107770020 uncharacterized LOC107799361 uncharacterized LOC9267764 uncharacterized LOC100274351 myosin-10 plectin plectin putative protein tag-278 coiled-coil domain-containing protein 57 uncharacterized LOC100831746
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00020 Citrate cycle (TCA cycle) 2
ghi00620 Pyruvate metabolism 2
ghi00785 Lipoic acid metabolism 2
ghi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
cit03460 Fanconi anemia pathway 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03430 Mismatch repair 6
vvi03030 DNA replication 5
vvi03420 Nucleotide excision repair 5
vvi03410 Base excision repair 4
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00460 Cyanoamino acid metabolism 3
tae00500 Starch and sucrose metabolism 3
tae00999 Biosynthesis of various plant secondary metabolites 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00310 Lysine degradation 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103871812 107903680 107959953 102625277 100855041 11412241 107770020 107799361 9267764 100274351 123151636 123160331 123167553 123411550 8062263 100831746
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