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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   atpB   ATP synthase CF1 beta subunit 
 ghi-r.1   107900061   ATP synthase subunit beta, chloroplastic-like 
 ghi-r.1   107889480   ATP synthase subunit beta, chloroplastic-like 
 ath-u.5   atpB   ATP synthase CF1 beta subunit 
 bra-r.6   117129781   ATP synthase subunit beta, chloroplastic 
 bra-r.6   117125991   ATP synthase subunit beta, chloroplastic 
 bna-r.1   125601659   ATP synthase subunit beta, chloroplastic-like 
 bna-r.1   125601657   ATP synthase subunit beta, chloroplastic-like 
 bna-r.1   125601396   ATP synthase subunit beta, chloroplastic-like 
 cit-r.1   atpB   ATP synthase CF1 beta subunit 
 gma-u.5   atpB   ATP synthase CF1 beta subunit 
 vvi-u.5   atpB   ATP synthase CF1 beta subunit 
 ppo-u.5   atpB   ATP synthase CF1 beta subunit 
 mtr-u.5   120580072   ATP synthase subunit beta, chloroplastic-like 
 mtr-u.5   120577094   ATP synthase subunit beta, chloroplastic 
 mtr-u.5   120576024   ATP synthase subunit beta, chloroplastic 
 sly-u.5   atpB   ATP synthase CF1 beta subunit 
 sot-r.1   102577864   ATP synthase subunit beta, chloroplastic 
 sot-r.1   atpB   ATP synthase CF1 beta subunit 
 nta-r.1   atpB   ATPase beta chain 
 osa-u.5   atpB   ATP synthase CF1 beta subunit 
 osa-u.5   112938260   ATP synthase subunit beta, chloroplastic 
 zma-u.5   118473923   ATP synthase subunit beta, chloroplastic-like 
 zma-u.5   118474850   ATP synthase subunit beta, chloroplastic 
 tae-r.2   123056111   ATP synthase subunit beta, chloroplastic-like 
 tae-r.2   123045578   ATP synthase subunit beta, chloroplastic 
 tae-r.2   123180887   ATP synthase subunit beta, chloroplastic 
 hvu-r.1   123420898   ATP synthase subunit beta, chloroplastic 
 hvu-r.1   123419612   ATP synthase subunit beta, chloroplastic 
 hvu-r.1   123419584   ATP synthase subunit beta, chloroplastic 
 sbi-r.1   atpB   ATP synthase CF1 beta subunit 
 bdi-r.1   atpB   ATP synthase CF1 beta subunit 

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Top 50 coexpressed genes to atpB (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to atpB (ghi-r.1 coexpression data)

CoexMap"3989156"


ghiatpB | Entrez gene ID : 3989156    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 1 2 3 1 1 1 1 3 1 2 1 2 2 3 3 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi00190 [list] [network] Oxidative phosphorylation (393 genes)
ghi00195 [list] [network] Photosynthesis (164 genes)
GO BP
GO CC
GO MF
Protein YP_538942.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 2,  mito 1,  extr 1,  cyto_E.R. 1  (predict for YP_538942.1)
Subcellular
localization
TargetP
other 7  (predict for YP_538942.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
atpB
ghi-r.1
for
107900061
ghi-r.1
for
107889480
ath-u.5
for
atpB
bra-r.6
for
117129781
bra-r.6
for
117125991
bna-r.1
for
125601659
bna-r.1
for
125601657
bna-r.1
for
125601396
cit-r.1
for
atpB
gma-u.5
for
atpB
vvi-u.5
for
atpB
ppo-u.5
for
atpB
mtr-u.5
for
120580072
mtr-u.5
for
120577094
mtr-u.5
for
120576024
sly-u.5
for
atpB
sot-r.1
for
102577864
sot-r.1
for
atpB
nta-r.1
for
atpB
osa-u.5
for
atpB
osa-u.5
for
112938260
zma-u.5
for
118473923
zma-u.5
for
118474850
tae-r.2
for
123056111
tae-r.2
for
123045578
tae-r.2
for
123180887
hvu-r.1
for
123420898
hvu-r.1
for
123419612
hvu-r.1
for
123419584
sbi-r.1
for
atpB
bdi-r.1
for
atpB


Ortholog ID: 769
Species ghi ghi ghi ath bra bra bna bna bna cit gma vvi ppo mtr mtr mtr sly sot sot nta osa osa zma zma zma tae tae hvu hvu sbi bdi
Symbol LOC107900061 LOC107889480 LOC121206139 atpB LOC117129781 LOC117125991 LOC125602857 LOC125595953 LOC125595919 atpB atpB atpB atpB LOC120577094 LOC120576024 atpB atpB LOC102577864 atpB atpB atpB LOC112938260 LOC118474821 LOC118474768 LOC118474756 LOC123180887 LOC123053158 LOC123420216 LOC123418893 atpB atpB
Function* ATP synthase subunit beta, chloroplastic-like ATP synthase subunit beta, chloroplastic-like ATP synthase subunit beta, chloroplastic ATP synthase CF1 beta subunit ATP synthase subunit beta, chloroplastic ATP synthase subunit beta, chloroplastic ATP synthase subunit beta, chloroplastic-like ATP synthase subunit beta, chloroplastic-like ATP synthase subunit beta, chloroplastic ATP synthase CF1 beta subunit ATP synthase CF1 beta subunit ATP synthase CF1 beta subunit ATP synthase CF1 beta subunit ATP synthase subunit beta, chloroplastic ATP synthase subunit beta, chloroplastic ATP synthase CF1 beta subunit ATP synthase CF1 beta subunit ATP synthase subunit beta, chloroplastic ATP synthase CF1 beta subunit ATPase beta chain ATP synthase CF1 beta subunit ATP synthase subunit beta, chloroplastic ATP synthase subunit beta, chloroplastic ATP synthase subunit beta, chloroplastic ATP synthase subunit beta, chloroplastic ATP synthase subunit beta, chloroplastic ATP synthase subunit beta, chloroplastic-like ATP synthase subunit beta, chloroplastic ATP synthase subunit beta, chloroplastic ATP synthase CF1 beta subunit ATP synthase CF1 beta subunit
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 9
ghi00195 Photosynthesis 9
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 9
ghi00195 Photosynthesis 8
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 9
ghi00195 Photosynthesis 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 6
ath03010 Ribosome 6
ath00190 Oxidative phosphorylation 5
ath00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 7
bra00190 Oxidative phosphorylation 4
bra00630 Glyoxylate and dicarboxylate metabolism 2
bra00710 Carbon fixation by Calvin cycle 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 7
bra00190 Oxidative phosphorylation 4
bra00630 Glyoxylate and dicarboxylate metabolism 2
bra00710 Carbon fixation by Calvin cycle 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 19
bna00195 Photosynthesis 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 20
bna00195 Photosynthesis 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 21
bna00195 Photosynthesis 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 10
cit00190 Oxidative phosphorylation 4
cit01200 Carbon metabolism 3
cit00970 Aminoacyl-tRNA biosynthesis 2
cit00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 9
gma00970 Aminoacyl-tRNA biosynthesis 4
gma03010 Ribosome 3
gma01200 Carbon metabolism 2
gma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 11
vvi00195 Photosynthesis 8
vvi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 7
ppo03010 Ribosome 5
ppo03020 RNA polymerase 4
ppo00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 4
mtr00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 4
mtr00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 4
mtr00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 7
sly03010 Ribosome 4
sly00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 11
sot00190 Oxidative phosphorylation 5
sot03010 Ribosome 4
sot01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 9
sot00190 Oxidative phosphorylation 7
sot00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 11
nta03010 Ribosome 3
nta01200 Carbon metabolism 2
nta00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00195 Photosynthesis 13
osa00190 Oxidative phosphorylation 4
osa00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00195 Photosynthesis 10
osa00190 Oxidative phosphorylation 6
osa03020 RNA polymerase 2
osa00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 13
zma00195 Photosynthesis 12
zma00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 8
zma00195 Photosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 11
zma00195 Photosynthesis 9
zma00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 10
tae00195 Photosynthesis 8
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 9
tae00630 Glyoxylate and dicarboxylate metabolism 6
tae00710 Carbon fixation by Calvin cycle 6
tae01200 Carbon metabolism 6
tae00190 Oxidative phosphorylation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00195 Photosynthesis 21
hvu00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 13
hvu00195 Photosynthesis 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 11
sbi00195 Photosynthesis 10
sbi03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 6
bdi00195 Photosynthesis 5
bdi00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107900061 107889480 121206139 844757 117129781 117125991 125602857 125595953 125595919 4271212 3989272 4025008 4929676 120577094 120576024 5333118 3950387 102577864 4099984 800515 3131462 112938260 118474821 118474768 118474756 123180887 123053158 123420216 123418893 4549166 6439896
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