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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   atpB   ATP synthase CF1 beta subunit 
 sly-u.5   atpB   ATP synthase CF1 beta subunit 
 ath-u.5   atpB   ATP synthase CF1 beta subunit 
 gma-u.5   atpB   ATP synthase CF1 beta subunit 
 vvi-u.5   atpB   ATP synthase CF1 beta subunit 
 ppo-u.5   atpB   ATP synthase CF1 beta subunit 
 mtr-u.5   120576024   ATP synthase subunit beta, chloroplastic 
 mtr-u.5   120580072   ATP synthase subunit beta, chloroplastic-like 
 mtr-u.5   atpB   ATP synthase CF1 beta subunit 
 osa-u.5   112938260   ATP synthase subunit beta, chloroplastic 
 osa-u.5   atpB   ATP synthase CF1 beta subunit 
 zma-u.5   118476107   ATP synthase subunit beta, chloroplastic 
 zma-u.5   118475435   ATP synthase subunit beta, chloroplastic 
 zma-u.5   118474850   ATP synthase subunit beta, chloroplastic 

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Top 50 coexpressed genes to atpB (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to atpB (sot-r.1 coexpression data)

CoexMap"4099984"


sotatpB | Entrez gene ID : 4099984    
Species sot sly ath gma vvi ppo mtr osa zma sbi nta bra cre hvu cit bdi tae bna ghi
Paralog 1 1 1 1 1 1 3 2 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sot00190 [list] [network] Oxidative phosphorylation (149 genes)
sot00195 [list] [network] Photosynthesis (86 genes)
GO BP
GO CC
GO MF
Protein YP_635646.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  mito 1  (predict for YP_635646.1)
Subcellular
localization
TargetP
other 7  (predict for YP_635646.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
atpB

.
sly-u.5
for
atpB

.
ath-u.5
for
atpB

.
gma-u.5
for
atpB

.
vvi-u.5
for
atpB

.
ppo-u.5
for
atpB

.
mtr-u.5
for
120576024

.
mtr-u.5
for
120580072

.
mtr-u.5
for
atpB

.
osa-u.5
for
112938260

.
osa-u.5
for
atpB

.
zma-u.5
for
118476107

.
zma-u.5
for
118475435

.
zma-u.5
for
118474850

.


Ortholog ID: 769
Species ath gma sly osa osa zma zma bra bra ppo mtr mtr tae hvu ghi ghi bna bna sbi sot sot cit bdi nta
Symbol atpB atpB atpB LOC112938260 atpB LOC118474756 LOC118474768 LOC117129781 LOC117125991 atpB LOC120576024 LOC120577094 LOC123180887 LOC123418893 LOC107889480 LOC121206139 LOC125595919 LOC125602857 atpB atpB LOC102577864 atpB atpB atpB
Function* ATP synthase CF1 beta subunit ATP synthase CF1 beta subunit ATP synthase CF1 beta subunit ATP synthase subunit beta, chloroplastic ATP synthase CF1 beta subunit ATP synthase subunit beta, chloroplastic ATP synthase subunit beta, chloroplastic ATP synthase subunit beta, chloroplastic ATP synthase subunit beta, chloroplastic ATP synthase CF1 beta subunit ATP synthase subunit beta, chloroplastic ATP synthase subunit beta, chloroplastic ATP synthase subunit beta, chloroplastic ATP synthase subunit beta, chloroplastic ATP synthase subunit beta, chloroplastic-like ATP synthase subunit beta, chloroplastic ATP synthase subunit beta, chloroplastic ATP synthase subunit beta, chloroplastic-like ATP synthase CF1 beta subunit ATP synthase CF1 beta subunit ATP synthase subunit beta, chloroplastic ATP synthase CF1 beta subunit ATP synthase CF1 beta subunit ATPase beta chain
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 6
ath03010 Ribosome 6
ath00190 Oxidative phosphorylation 5
ath00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 9
gma00970 Aminoacyl-tRNA biosynthesis 4
gma03010 Ribosome 3
gma01200 Carbon metabolism 2
gma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 7
sly03010 Ribosome 4
sly00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00195 Photosynthesis 10
osa00190 Oxidative phosphorylation 6
osa03020 RNA polymerase 2
osa00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00195 Photosynthesis 13
osa00190 Oxidative phosphorylation 4
osa00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 11
zma00195 Photosynthesis 9
zma00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 8
zma00195 Photosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 7
bra00190 Oxidative phosphorylation 4
bra00630 Glyoxylate and dicarboxylate metabolism 2
bra00710 Carbon fixation by Calvin cycle 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 7
bra00190 Oxidative phosphorylation 4
bra00630 Glyoxylate and dicarboxylate metabolism 2
bra00710 Carbon fixation by Calvin cycle 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 7
ppo03010 Ribosome 5
ppo03020 RNA polymerase 4
ppo00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 4
mtr00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 4
mtr00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 10
tae00195 Photosynthesis 8
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 13
hvu00195 Photosynthesis 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 9
ghi00195 Photosynthesis 8
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 9
ghi00195 Photosynthesis 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 21
bna00195 Photosynthesis 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 19
bna00195 Photosynthesis 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 11
sbi00195 Photosynthesis 10
sbi03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 9
sot00190 Oxidative phosphorylation 7
sot00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 11
sot00190 Oxidative phosphorylation 5
sot03010 Ribosome 4
sot01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 10
cit00190 Oxidative phosphorylation 4
cit01200 Carbon metabolism 3
cit00970 Aminoacyl-tRNA biosynthesis 2
cit00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 6
bdi00195 Photosynthesis 5
bdi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 11
nta03010 Ribosome 3
nta01200 Carbon metabolism 2
nta00190 Oxidative phosphorylation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 844757 3989272 3950387 112938260 3131462 118474756 118474768 117129781 117125991 4929676 120576024 120577094 123180887 123418893 107889480 121206139 125595919 125602857 4549166 4099984 102577864 4271212 6439896 800515
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