ATTED-II : GeneCoexpression result

Species	Gene	Description
sbi-r.1	rps2B	ribosomal protein S2
zma-u.5	118474731	uncharacterized LOC118474731
zma-u.5	118475796	uncharacterized LOC118475796
osa-u.5	112937437	uncharacterized LOC112937437
osa-u.5	107279602	uncharacterized LOC107279602
hvu-r.1	123418204	uncharacterized LOC123418204
ath-u.5	RPS2	ribosomal protein S2
gma-u.5	100812583	UTP--glucose-1-phosphate uridylyltransferase
sly-u.5	101263844	RPS2 and Glyco-transfer-GTA type domain-containing protein
bra-r.6	103855170	ribosomal protein S2, mitochondrial
bra-r.6	103859006	ribosomal protein S2, mitochondrial
vvi-u.5	100264069	small ribosomal subunit protein uS2m
ppo-u.5	7493860	UTP--glucose-1-phosphate uridylyltransferase
mtr-u.5	11414320	UTP--glucose-1-phosphate uridylyltransferase
mtr-u.5	112422206	UTP--glucose-1-phosphate uridylyltransferase 2
ghi-r.1	107891001	ribosomal protein S2, mitochondrial
ghi-r.1	107913328	UTP--glucose-1-phosphate uridylyltransferase
bna-r.1	125609169	ribosomal protein S2, mitochondrial-like
bna-r.1	106447611	ribosomal protein S2, mitochondrial
bna-r.1	106438963	ribosomal protein S2, mitochondrial
sot-r.1	102586654	ribosomal protein S2, mitochondrial
cit-r.1	102627594	UTP--glucose-1-phosphate uridylyltransferase-like
nta-r.1	107807768	UTP--glucose-1-phosphate uridylyltransferase
nta-r.1	107819480	UTP--glucose-1-phosphate uridylyltransferase

Annotation

functional annotation

KEGG

sbi03010 [list] [network] Ribosome (360 genes)

GO BP

GO CC

GO MF

Protein

YP_762330.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 9, nucl 1, mito 1

(predict for YP_762330.1)

Subcellular
localization
TargetP

mito 7

(predict for YP_762330.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sbi-r.1 for rps2B	zma-u.5 for 118474731	zma-u.5 for 118475796	osa-u.5 for 112937437	osa-u.5 for 107279602	hvu-r.1 for 123418204	ath-u.5 for RPS2	gma-u.5 for 100812583	sly-u.5 for 101263844	bra-r.6 for 103855170	bra-r.6 for 103859006	vvi-u.5 for 100264069	ppo-u.5 for 7493860	mtr-u.5 for 11414320	mtr-u.5 for 112422206	ghi-r.1 for 107891001	ghi-r.1 for 107913328	bna-r.1 for 125609169	bna-r.1 for 106447611	bna-r.1 for 106438963	sot-r.1 for 102586654	cit-r.1 for 102627594	nta-r.1 for 107807768	nta-r.1 for 107819480

Ortholog

Ortholog ID: 7578

Species

sbi

zma

osa

hvu

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

rps2B

RPS2

Function^*

ribosomal protein S2

uncharacterized LOC118474731

uncharacterized LOC118475796

uncharacterized LOC112937437

uncharacterized LOC107279602

uncharacterized LOC123418204

ribosomal protein S2

UTP--glucose-1-phosphate uridylyltransferase

RPS2 and Glyco-transfer-GTA type domain-containing protein

ribosomal protein S2, mitochondrial

small ribosomal subunit protein uS2m

UTP--glucose-1-phosphate uridylyltransferase

UTP--glucose-1-phosphate uridylyltransferase 2

ribosomal protein S2, mitochondrial

UTP--glucose-1-phosphate uridylyltransferase

ribosomal protein S2, mitochondrial-like

ribosomal protein S2, mitochondrial

ribosomal protein S2, mitochondrial-like

ribosomal protein S2, mitochondrial

UTP--glucose-1-phosphate uridylyltransferase-like

UTP--glucose-1-phosphate uridylyltransferase

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00190	Oxidative phosphorylation	9
sbi03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00190	Oxidative phosphorylation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00190	Oxidative phosphorylation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00190	Oxidative phosphorylation	7
osa03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00190	Oxidative phosphorylation	7
osa03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00195	Photosynthesis	8
hvu03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	2
gma00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03083	Polycomb repressive complex	2
sly00510	N-Glycan biosynthesis	2
sly04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra01240	Biosynthesis of cofactors	2
bra00710	Carbon fixation by Calvin cycle	2
bra01200	Carbon metabolism	2
bra01230	Biosynthesis of amino acids	2
bra03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	15

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00510	N-Glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03020	RNA polymerase	4
ghi03008	Ribosome biogenesis in eukaryotes	2
ghi00040	Pentose and glucuronate interconversions	2
ghi00052	Galactose metabolism	2
ghi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi01240	Biosynthesis of cofactors	4
ghi00010	Glycolysis / Gluconeogenesis	2
ghi00620	Pyruvate metabolism	2
ghi01200	Carbon metabolism	2
ghi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03008	Ribosome biogenesis in eukaryotes	2
sot03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00970	Aminoacyl-tRNA biosynthesis	4
nta03008	Ribosome biogenesis in eukaryotes	2
nta03020	RNA polymerase	2
nta00040	Pentose and glucuronate interconversions	2
nta00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03008	Ribosome biogenesis in eukaryotes	2
nta03020	RNA polymerase	2
nta00040	Pentose and glucuronate interconversions	2
nta00052	Galactose metabolism	2
nta00500	Starch and sucrose metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

4306026

118474731

118475796

112937437

107279602

123418204

821211

100812583

101263844

103855170

103859006

100264069

7493860

11414320

112422206

107891001

107913328

125609169

106438963

106418691

102586654

102627594

107807768

107819480

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to rps2B (sbi-r.1 coexpression data)

Top 50 enrichment test to rps2B (sbi-r.1 coexpression data)


Species	sbi	zma	osa	hvu	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre	tae	bdi
Paralog	1	2	2	1	1	1	1	2	1	1	2	2	3	1	1	2	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to rps2B (sbi-r.1 coexpression data)

Top 50 enrichment test to rps2B (sbi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**