ATTED-II : GeneCoexpression result

Species	Gene	Description
osa-u.5	4324428	protein STICHEL-like 4
osa-r.6	4324428	protein STICHEL-like 4
osa-m.8	4324428	protein STICHEL-like 4
osa-e.1	4324428	protein STICHEL-like 4
osa-u.5	4339405	protein STICHEL-like 4
zma-u.5	103636253	protein STICHEL-like 4
zma-u.5	103651238	protein STICHEL-like 3
zma-u.5	100381942	uncharacterized LOC100381942
ath-u.5	AT4G18820	AAA-type ATPase family protein
ath-u.5	AT5G45720	AAA-type ATPase family protein
gma-u.5	100809005	protein STICHEL-like 3
gma-u.5	100793832	protein STICHEL-like 3
sly-u.5	101268831	protein STICHEL-like 4
vvi-u.5	100249702	protein STICHEL-like 3
ppo-u.5	7463813	protein STICHEL-like 3
ppo-u.5	7476317	protein STICHEL-like 3
mtr-u.5	11438310	protein STICHEL-like 3

Annotation

functional annotation

KEGG

GO BP

GO:0006261 [list] [network] DNA-templated DNA replication	(83 genes)	IEA
GO:0006281 [list] [network] DNA repair	(289 genes)	IEA

GO CC

GO:0009360 [list] [network] DNA polymerase III complex	(6 genes)	IEA
GO:0005663 [list] [network] DNA replication factor C complex	(13 genes)	IEA
GO:0005634 [list] [network] nucleus	(3003 genes)	IEA

GO MF

GO:0003689 [list] [network] DNA clamp loader activity	(15 genes)	IEA
GO:0003887 [list] [network] DNA-directed DNA polymerase activity	(23 genes)	IEA
GO:0003677 [list] [network] DNA binding	(1843 genes)	IEA
GO:0005524 [list] [network] ATP binding	(2335 genes)	IEA

Protein

XP_015621830.1 [sequence] [blastp]
XP_015621831.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 7, nucl 2	(predict for XP_015621830.1)
chlo 7, nucl 2	(predict for XP_015621831.1)

Subcellular
localization
TargetP

other 6	(predict for XP_015621830.1)
other 6	(predict for XP_015621831.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	osa-u.5 for 4324428	osa-r.6 for 4324428	osa-m.8 for 4324428	osa-e.1 for 4324428	osa-u.5 for 4339405	zma-u.5 for 103636253	zma-u.5 for 103651238	zma-u.5 for 100381942	ath-u.5 for AT4G18820	ath-u.5 for AT5G45720	gma-u.5 for 100809005	gma-u.5 for 100793832	sly-u.5 for 101268831	vvi-u.5 for 100249702	ppo-u.5 for 7463813	ppo-u.5 for 7476317	mtr-u.5 for 11438310

Ortholog

Ortholog ID: 4106

Species

osa

tae

hvu

bdi

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

protein STICHEL-like 4

protein STICHEL-like 3

protein STICHEL-like 4

protein STICHEL-like 3

protein STICHEL-like 4

protein STICHEL-like 3

protein STICHEL-like 4

AAA-type ATPase family protein

protein STICHEL-like 3

protein STICHEL-like 4

protein STICHEL-like 3

protein STICHEL-like 4

protein STICHEL-like 3

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04144	Endocytosis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00640	Propanoate metabolism	3
hvu04016	MAPK signaling pathway - plant	3
hvu04075	Plant hormone signal transduction	3
hvu00061	Fatty acid biosynthesis	2
hvu00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04075	Plant hormone signal transduction	3
bdi04626	Plant-pathogen interaction	3
bdi04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04075	Plant hormone signal transduction	2
bdi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03030	DNA replication	2
bra04814	Motor proteins	2
bra03082	ATP-dependent chromatin remodeling	2
bra03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00010	Glycolysis / Gluconeogenesis	8
ghi01200	Carbon metabolism	8
ghi01230	Biosynthesis of amino acids	8
ghi03018	RNA degradation	7
ghi04820	Cytoskeleton in muscle cells	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	5
ghi00230	Purine metabolism	3
ghi00220	Arginine biosynthesis	2
ghi00240	Pyrimidine metabolism	2
ghi00250	Alanine, aspartate and glutamate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00220	Arginine biosynthesis	3
nta00240	Pyrimidine metabolism	3
nta00250	Alanine, aspartate and glutamate metabolism	3
nta01240	Biosynthesis of cofactors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00220	Arginine biosynthesis	2
nta00240	Pyrimidine metabolism	2
nta00250	Alanine, aspartate and glutamate metabolism	2
nta01240	Biosynthesis of cofactors	2

Expression

Expression pattern

Entrez Gene ID^*

4324428

4339405

123064089

123141482

123444341

123401668

100843955

100837374

103636253

103651238

8062130

8084438

834611

827616

100809005

100793832

101268831

103827780

103839645

100249702

7476317

7463813

11438310

121230878

107891761

106366748

106435889

102594808

102625300

107786286

107807661

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 4324428 (osa-u.5 coexpression data)

Top 50 enrichment test to 4324428 (osa-u.5 coexpression data)


Species	osa	zma	ath	gma	sly	vvi	ppo	mtr	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	5	3	2	2	1	1	2	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 4324428 (osa-u.5 coexpression data)

Top 50 enrichment test to 4324428 (osa-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**