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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8084438   protein STICHEL-like 4 
 zma-u.5   103651238   protein STICHEL-like 3 
 zma-u.5   100381942   uncharacterized LOC100381942 
 zma-u.5   103636253   protein STICHEL-like 4 
 osa-u.5   4324428   protein STICHEL-like 4 
 osa-u.5   4339405   protein STICHEL-like 4 
 ath-u.5   AT4G18820   AAA-type ATPase family protein 
 ath-u.5   AT5G45720   AAA-type ATPase family protein 
 gma-u.5   100793832   protein STICHEL-like 3 
 gma-u.5   100809005   protein STICHEL-like 3 
 sly-u.5   101268831   protein STICHEL-like 4 
 vvi-u.5   100249702   protein STICHEL-like 3 
 ppo-u.5   7476317   protein STICHEL-like 3 
 ppo-u.5   7463813   protein STICHEL-like 3 
 mtr-u.5   11438310   protein STICHEL-like 3 

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Top 50 coexpressed genes to 8084438 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8084438 (sbi-r.1 coexpression data)

CoexMap"8084438"


sbiLOC8084438 | Entrez gene ID : 8084438    
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 3 2 2 2 1 1 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006261 [list] [network] DNA-templated DNA replication  (88 genes)  IEA  
GO:0006281 [list] [network] DNA repair  (318 genes)  IEA  
GO CC
GO:0009360 [list] [network] DNA polymerase III complex  (6 genes)  IEA  
GO:0005663 [list] [network] DNA replication factor C complex  (15 genes)  IEA  
GO:0005634 [list] [network] nucleus  (2977 genes)  IEA  
GO MF
GO:0003689 [list] [network] DNA clamp loader activity  (15 genes)  IEA  
GO:0003887 [list] [network] DNA-directed DNA polymerase activity  (22 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (1849 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2084 genes)  IEA  
Protein XP_002440119.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  cyto 2  (predict for XP_002440119.2)
Subcellular
localization
TargetP
chlo 6,  other 5  (predict for XP_002440119.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8084438

.
zma-u.5
for
103651238

.
zma-u.5
for
100381942

.
zma-u.5
for
103636253

.
osa-u.5
for
4324428

.
osa-u.5
for
4339405

.
ath-u.5
for
AT4G18820

.
ath-u.5
for
AT5G45720

.
gma-u.5
for
100793832

.
gma-u.5
for
100809005

.
sly-u.5
for
101268831

.
vvi-u.5
for
100249702

.
ppo-u.5
for
7476317

.
ppo-u.5
for
7463813

.
mtr-u.5
for
11438310

.


Ortholog ID: 4106
Species ath ath gma gma sly osa osa zma zma bra bra vvi ppo ppo mtr tae tae hvu hvu ghi ghi bna bna sbi sbi sot cit bdi bdi nta nta
Symbol AT5G45720 AT4G18820 LOC100809005 LOC100793832 LOC101268831 LOC4324428 LOC4339405 LOC103636253 LOC103651238 LOC103827780 LOC103839645 LOC100249702 LOC7476317 LOC7463813 LOC11438310 LOC123064089 LOC123141482 LOC123444341 LOC123401668 LOC121230878 LOC107891761 LOC106366748 LOC106435889 LOC8062130 LOC8084438 LOC102594808 LOC102625300 LOC100843955 LOC100837374 LOC107786286 LOC107807661
Function* AAA-type ATPase family protein AAA-type ATPase family protein protein STICHEL-like 3 protein STICHEL-like 3 protein STICHEL-like 4 protein STICHEL-like 4 protein STICHEL-like 4 protein STICHEL-like 4 protein STICHEL-like 3 protein STICHEL-like 4 protein STICHEL-like 4 protein STICHEL-like 3 protein STICHEL-like 3 protein STICHEL-like 3 protein STICHEL-like 3 protein STICHEL-like 3 protein STICHEL-like 4 protein STICHEL-like 4 protein STICHEL-like 3 protein STICHEL-like 3 protein STICHEL-like 3 protein STICHEL-like 4 protein STICHEL-like 4 protein STICHEL-like 3 protein STICHEL-like 4 protein STICHEL-like 3 protein STICHEL-like 3 protein STICHEL-like 3 protein STICHEL-like 3 protein STICHEL-like 3 protein STICHEL-like 3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 2
bra04814 Motor proteins 2
bra03082 ATP-dependent chromatin remodeling 2
bra03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00640 Propanoate metabolism 3
hvu04016 MAPK signaling pathway - plant 3
hvu04075 Plant hormone signal transduction 3
hvu00061 Fatty acid biosynthesis 2
hvu00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00010 Glycolysis / Gluconeogenesis 8
ghi01200 Carbon metabolism 8
ghi01230 Biosynthesis of amino acids 8
ghi03018 RNA degradation 7
ghi04820 Cytoskeleton in muscle cells 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 5
ghi00230 Purine metabolism 3
ghi00220 Arginine biosynthesis 2
ghi00240 Pyrimidine metabolism 2
ghi00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 3
bdi04626 Plant-pathogen interaction 3
bdi04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
bdi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00220 Arginine biosynthesis 3
nta00240 Pyrimidine metabolism 3
nta00250 Alanine, aspartate and glutamate metabolism 3
nta01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00220 Arginine biosynthesis 2
nta00240 Pyrimidine metabolism 2
nta00250 Alanine, aspartate and glutamate metabolism 2
nta01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834611 827616 100809005 100793832 101268831 4324428 4339405 103636253 103651238 103827780 103839645 100249702 7476317 7463813 11438310 123064089 123141482 123444341 123401668 121230878 107891761 106366748 106435889 8062130 8084438 102594808 102625300 100843955 100837374 107786286 107807661
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