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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5   4325650   AP2/ERF and B3 domain-containing protein Os01g0693400-like 
 osa-r.6   4325650   AP2/ERF and B3 domain-containing protein Os01g0693400-like 
 osa-m.8   4325650   AP2/ERF and B3 domain-containing protein Os01g0693400-like 
 osa-e.1   4325650   AP2/ERF and B3 domain-containing protein Os01g0693400-like 
 osa-u.5   4339522   AP2/ERF and B3 domain-containing protein Os05g0549800-like 
 osa-u.5   107277455   putative AP2/ERF and B3 domain-containing protein Os01g0140700 
 zma-u.5   103635292   AP2/ERF and B3 domain-containing protein Os05g0549800 
 zma-u.5   103626167   AP2/ERF and B3 domain-containing protein Os01g0693400 
 zma-u.5   100284738   DNA-binding protein RAV1 
 ath-u.5   EDF3   ethylene response DNA binding factor 3 
 ath-u.5   RAV1   uncharacterized protein 
 ath-u.5   TEM1   AP2/B3 transcription factor family protein 
 gma-u.5   RAV   RAV-like DNA-binding protein 
 gma-u.5   100789009   AP2/ERF and B3 domain-containing transcription repressor RAV2 
 gma-u.5   100801107   AP2/ERF and B3 domain-containing transcription repressor TEM1 
 sly-u.5   RAV2   transcription factor RELATED TO ABI3/VP1 2 
 sly-u.5   101259430   AP2/ERF and B3 domain-containing transcription factor RAV1 
 vvi-u.5   100262843   AP2/ERF and B3 domain-containing transcription factor RAV1 
 ppo-u.5   7466917   AP2/ERF and B3 domain-containing transcription repressor TEM1 
 ppo-u.5   7483931   AP2/ERF and B3 domain-containing transcription repressor RAV2 
 mtr-u.5   11422381   AP2/ERF and B3 domain-containing transcription factor RAV1 
 mtr-u.5   11436458   AP2/ERF and B3 domain-containing transcription factor RAV1 

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Top 50 coexpressed genes to 4325650 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4325650 (osa-u.5 coexpression data)

CoexMap"4325650"


osaLOC4325650 | Entrez gene ID : 4325650      
Species osa zma ath gma sly vvi ppo mtr sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 6 3 3 3 2 1 2 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1615 genes)  IEA  
GO CC
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1113 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (1843 genes)  IEA  
Protein NP_001388398.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 3,  cyto 3,  cyto_nucl 3,  mito 2  (predict for NP_001388398.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001388398.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.5
for
4325650

.
osa-r.6
for
4325650

.
osa-m.8
for
4325650

.
osa-e.1
for
4325650

.
osa-u.5
for
4339522

.
osa-u.5
for
107277455

.
zma-u.5
for
103635292

.
zma-u.5
for
103626167

.
zma-u.5
for
100284738

.
ath-u.5
for
EDF3

.
ath-u.5
for
RAV1

.
ath-u.5
for
TEM1

.
gma-u.5
for
RAV

.
gma-u.5
for
100789009

.
gma-u.5
for
100801107

.
sly-u.5
for
RAV2

.
sly-u.5
for
101259430

.
vvi-u.5
for
100262843

.
ppo-u.5
for
7466917

.
ppo-u.5
for
7483931

.
mtr-u.5
for
11422381

.
mtr-u.5
for
11436458

.


Ortholog ID: 1274
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi ppo ppo mtr mtr tae hvu hvu ghi ghi bna bna sbi sbi sot sot cit cit bdi bdi nta nta
Symbol EDF3 RAV2 LOC100789009 RAV1 RAV2 LOC101259430 LOC4325650 LOC4339522 LOC100284738 LOC103635292 LOC103875354 LOC103853887 LOC100262843 LOC7483931 LOC7466917 LOC11436458 LOC11422381 LOC123078915 LOC123418113 LOC123449102 LOC107887166 LOC121211011 LOC106361860 LOC106424347 LOC8063099 LOC8061113 LOC102584696 LOC102588131 LOC102623184 LOC102623456 LOC100824064 LOC100838675 LOC107829180 LOC107788490
Function* ethylene response DNA binding factor 3 uncharacterized protein AP2/ERF and B3 domain-containing transcription repressor RAV2 AP2/ERF transcription factor family protein RAV1 transcription factor RELATED TO ABI3/VP1 2 AP2/ERF and B3 domain-containing transcription factor RAV1 AP2/ERF and B3 domain-containing protein Os01g0693400-like AP2/ERF and B3 domain-containing protein Os05g0549800-like DNA-binding protein RAV1 AP2/ERF and B3 domain-containing protein Os05g0549800 AP2/ERF and B3 domain-containing transcription factor ARF14 AP2/ERF and B3 domain-containing transcription factor ARF14 AP2/ERF and B3 domain-containing transcription factor RAV1 AP2/ERF and B3 domain-containing transcription repressor RAV2 AP2/ERF and B3 domain-containing transcription repressor TEM1 AP2/ERF and B3 domain-containing transcription factor RAV1 AP2/ERF and B3 domain-containing transcription factor RAV1 AP2/ERF and B3 domain-containing protein Os01g0693400 AP2/ERF and B3 domain-containing protein Os05g0549800-like AP2/ERF and B3 domain-containing protein Os05g0549800-like AP2/ERF and B3 domain-containing transcription factor RAV1 AP2/ERF and B3 domain-containing transcription factor RAV1 AP2/ERF and B3 domain-containing transcription repressor TEM1-like AP2/ERF and B3 domain-containing transcription factor ARF14 AP2/ERF and B3 domain-containing protein Os01g0693400 AP2/ERF and B3 domain-containing protein Os05g0549800 AP2/ERF and B3 domain-containing transcription factor RAV1 AP2/ERF and B3 domain-containing transcription factor RAV1 AP2/ERF and B3 domain-containing transcription repressor RAV2-like AP2/ERF and B3 domain-containing transcription repressor RAV2 AP2/ERF and B3 domain-containing protein Os05g0549800 putative AP2/ERF and B3 domain-containing protein Os01g0140700 AP2/ERF and B3 domain-containing transcription factor RAV1 AP2/ERF and B3 domain-containing transcription repressor RAV2-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 3
ath04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 3
sly04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04016 MAPK signaling pathway - plant 2
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 5
bra04016 MAPK signaling pathway - plant 3
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 2
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04016 MAPK signaling pathway - plant 3
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04016 MAPK signaling pathway - plant 5
mtr04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04016 MAPK signaling pathway - plant 4
mtr04075 Plant hormone signal transduction 4
mtr00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04016 MAPK signaling pathway - plant 2
tae04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 4
ghi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04016 MAPK signaling pathway - plant 2
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04016 MAPK signaling pathway - plant 8
sot04075 Plant hormone signal transduction 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04016 MAPK signaling pathway - plant 7
cit04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 4
bdi04016 MAPK signaling pathway - plant 3
bdi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04016 MAPK signaling pathway - plant 2
bdi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
nta00906 Carotenoid biosynthesis 2
nta04016 MAPK signaling pathway - plant 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 6
nta04075 Plant hormone signal transduction 4
nta04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 822164 843216 100789009 100776987 101264719 101259430 4325650 4339522 100284738 103635292 103875354 103853887 100262843 7483931 7466917 11436458 11422381 123078915 123418113 123449102 107887166 121211011 106361860 106424347 8063099 8061113 102584696 102588131 102623184 102623456 100824064 100838675 107829180 107788490
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