ATTED-II : GeneCoexpression result

Species	Gene	Description
osa-u.5	4326615	DEAD-box ATP-dependent RNA helicase 26-like
osa-r.6	4326615	DEAD-box ATP-dependent RNA helicase 26-like
osa-m.8	4326615	DEAD-box ATP-dependent RNA helicase 26-like
osa-e.1	4326615	DEAD-box ATP-dependent RNA helicase 26-like
osa-u.5	4326614	DEAD-box ATP-dependent RNA helicase 25-like
osa-u.5	4341186	DEAD-box ATP-dependent RNA helicase 31-like
zma-u.5	103638522	DEAD-box ATP-dependent RNA helicase 31
zma-u.5	103651490	DEAD-box ATP-dependent RNA helicase 25
zma-u.5	100279341	uncharacterized LOC100279341
ath-u.5	PDE340	P-loop containing nucleoside triphosphate hydrolases superfamily protein
ath-u.5	STRS2	DEA(D/H)-box RNA helicase family protein
ath-u.5	AT5G63630	P-loop containing nucleoside triphosphate hydrolases superfamily protein
gma-u.5	100795739	DEAD-box ATP-dependent RNA helicase 31
gma-u.5	100799999	DEAD-box ATP-dependent RNA helicase 31
sly-u.5	101245996	DEAD-box ATP-dependent RNA helicase 31-like
vvi-u.5	100258444	DEAD-box ATP-dependent RNA helicase 31
ppo-u.5	7457393	DEAD-box ATP-dependent RNA helicase 31
ppo-u.5	7492773	DEAD-box ATP-dependent RNA helicase 31
mtr-u.5	25500712	DEAD-box ATP-dependent RNA helicase 31
mtr-u.5	25500710	DEAD-box ATP-dependent RNA helicase 31
mtr-u.5	25500711	DEAD-box ATP-dependent RNA helicase 31

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0009507 [list] [network] chloroplast

(655 genes)

IEA

GO MF

GO:0003724 [list] [network] RNA helicase activity	(63 genes)	IEA
GO:0005524 [list] [network] ATP binding	(2335 genes)	IEA
GO:0003676 [list] [network] nucleic acid binding	(3512 genes)	IEA

Protein

NP_001384969.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, mito 2, chlo 1, mito_plas 1

(predict for NP_001384969.1)

Subcellular
localization
TargetP

other 4, mito 3

(predict for NP_001384969.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	osa-u.5 for 4326615	osa-r.6 for 4326615	osa-m.8 for 4326615	osa-e.1 for 4326615	osa-u.5 for 4326614	osa-u.5 for 4341186	zma-u.5 for 103638522	zma-u.5 for 103651490	zma-u.5 for 100279341	ath-u.5 for PDE340	ath-u.5 for STRS2	ath-u.5 for AT5G63630	gma-u.5 for 100795739	gma-u.5 for 100799999	sly-u.5 for 101245996	vvi-u.5 for 100258444	ppo-u.5 for 7457393	ppo-u.5 for 7492773	mtr-u.5 for 25500712	mtr-u.5 for 25500710	mtr-u.5 for 25500711

Ortholog

Ortholog ID: 2753

Species

osa

tae

hvu

bdi

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

PDE340

STRS2

Function^*

DEAD-box ATP-dependent RNA helicase 31-like

DEAD-box ATP-dependent RNA helicase 25-like

DEAD-box ATP-dependent RNA helicase 31

DEAD-box ATP-dependent RNA helicase 26

DEAD-box ATP-dependent RNA helicase 31

DEAD-box ATP-dependent RNA helicase 25-like

DEAD-box ATP-dependent RNA helicase 25

DEAD-box ATP-dependent RNA helicase 26

uncharacterized LOC100279341

DEAD-box ATP-dependent RNA helicase 25

DEAD-box ATP-dependent RNA helicase 26

DEAD-box ATP-dependent RNA helicase 25

P-loop containing nucleoside triphosphate hydrolases superfamily protein

DEA(D/H)-box RNA helicase family protein

DEAD-box ATP-dependent RNA helicase 31

DEAD-box ATP-dependent RNA helicase 31-like

DEAD-box ATP-dependent RNA helicase 25

DEAD-box ATP-dependent RNA helicase 26

DEAD-box ATP-dependent RNA helicase 31

DEAD-box ATP-dependent RNA helicase 25-like

DEAD-box ATP-dependent RNA helicase 26-like

DEAD-box ATP-dependent RNA helicase 31-like

DEAD-box ATP-dependent RNA helicase 31

DEAD-box ATP-dependent RNA helicase 31-like

DEAD-box ATP-dependent RNA helicase 31

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03008	Ribosome biogenesis in eukaryotes	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03008	Ribosome biogenesis in eukaryotes	4
tae03018	RNA degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03013	Nucleocytoplasmic transport	3
hvu03018	RNA degradation	2
hvu03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03008	Ribosome biogenesis in eukaryotes	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03013	Nucleocytoplasmic transport	2
zma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00970	Aminoacyl-tRNA biosynthesis	7
sbi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03008	Ribosome biogenesis in eukaryotes	4
ath00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00240	Pyrimidine metabolism	2
gma01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03008	Ribosome biogenesis in eukaryotes	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00230	Purine metabolism	3
mtr00670	One carbon pool by folate	2
mtr03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03008	Ribosome biogenesis in eukaryotes	3
mtr00230	Purine metabolism	2
mtr00670	One carbon pool by folate	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna01230	Biosynthesis of amino acids	3
bna00450	Selenocompound metabolism	3
bna00970	Aminoacyl-tRNA biosynthesis	3
bna00300	Lysine biosynthesis	2
bna00470	D-Amino acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00500	Starch and sucrose metabolism	2
nta04141	Protein processing in endoplasmic reticulum	2
nta04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00500	Starch and sucrose metabolism	2
nta04141	Protein processing in endoplasmic reticulum	2
nta04626	Plant-pathogen interaction	2

Expression

Expression pattern

Entrez Gene ID^*

4341186

4326614

123156504

123065441

123407193

123443891

100831244

100845683

100279341

103651490

8084836

8054392

830762

830763

100795739

100799999

101245996

103847174

103847175

100258444

7457393

7492773

25500710

25500711

107909798

107923895

125581627

125579080

102605904

102616648

127901017

107780767

107760327

5723434

5723507

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 4326615 (osa-u.5 coexpression data)

Top 50 enrichment test to 4326615 (osa-u.5 coexpression data)


Species	osa	zma	ath	gma	sly	vvi	ppo	mtr	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	6	3	3	2	1	1	2	3	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 4326615 (osa-u.5 coexpression data)

Top 50 enrichment test to 4326615 (osa-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**