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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5   4328686   uncharacterized LOC4328686 
 osa-r.6   4328686   uncharacterized LOC4328686 
 osa-m.8   4328686   uncharacterized LOC4328686 
 osa-e.1   4328686   uncharacterized LOC4328686 
 zma-u.5   100276452   uncharacterized LOC100276452 
 zma-u.5   100303796   uncharacterized LOC100303796 
 ath-u.5   AT5G19960   RNA-binding (RRM/RBD/RNP motifs) family protein 
 gma-u.5   100816804   probable splicing factor, arginine/serine-rich 6 
 gma-u.5   100797556   glycine-rich RNA-binding protein RZ1B 
 vvi-u.5   100245744   uncharacterized LOC100245744 
 ppo-u.5   112325085   zinc finger CCCH domain-containing protein 25 
 mtr-u.5   11442835   RNA-binding protein 25 

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Top 50 coexpressed genes to 4328686 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4328686 (osa-u.5 coexpression data)

CoexMap"4328686"


osaLOC4328686 | Entrez gene ID : 4328686    
Species osa zma ath gma vvi ppo mtr tae hvu ghi bdi cit bra cre sbi bna sly nta sot
Paralog 4 2 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (3003 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1223 genes)  IEA  
Protein XP_015627192.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_015627192.1)
Subcellular
localization
TargetP
other 8  (predict for XP_015627192.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.5
for
4328686

.
osa-r.6
for
4328686

.
osa-m.8
for
4328686

.
osa-e.1
for
4328686

.
zma-u.5
for
100276452

.
zma-u.5
for
100303796

.
ath-u.5
for
AT5G19960

.
gma-u.5
for
100816804

.
gma-u.5
for
100797556

.
vvi-u.5
for
100245744

.
ppo-u.5
for
112325085

.
mtr-u.5
for
11442835

.


Ortholog ID: 10948
Species ath gma gma osa zma zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi cit bdi nta nta
Symbol AT5G19960 LOC100797556 LOC100816804 LOC4328686 LOC100303796 LOC100276452 LOC103851314 LOC100245744 LOC112325085 LOC11442835 LOC123136884 LOC123144340 LOC123401234 LOC107907427 LOC107907244 LOC106386733 LOC106425672 LOC110434697 LOC102608322 LOC100826556 LOC107798967 LOC107823355
Function* RNA-binding (RRM/RBD/RNP motifs) family protein glycine-rich RNA-binding protein RZ1B probable splicing factor, arginine/serine-rich 6 uncharacterized LOC4328686 uncharacterized LOC100303796 uncharacterized LOC100276452 zinc finger CCCH domain-containing protein 25 uncharacterized LOC100245744 zinc finger CCCH domain-containing protein 25 RNA-binding protein 25 U1 small nuclear ribonucleoprotein 70 kDa U1 small nuclear ribonucleoprotein 70 kDa zinc finger CCCH domain-containing protein 13 zinc finger CCCH domain-containing protein 25 zinc finger CCCH domain-containing protein 25 cold-inducible RNA-binding protein A zinc finger CCCH domain-containing protein 25 uncharacterized protein DDB_G0284459 glycine-rich RNA-binding protein RZ1A U1 small nuclear ribonucleoprotein 70 kDa uncharacterized LOC107798967 uncharacterized LOC107823355
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 3
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
zma03082 ATP-dependent chromatin remodeling 3
zma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 2
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03250 Viral life cycle - HIV-1 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 6
bna03250 Viral life cycle - HIV-1 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 6
bna03250 Viral life cycle - HIV-1 6
bna00790 Folate biosynthesis 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00261 Monobactam biosynthesis 2
sbi00300 Lysine biosynthesis 2
sbi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 6
bdi03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 832118 100797556 100816804 4328686 100303796 100276452 103851314 100245744 112325085 11442835 123136884 123144340 123401234 107907427 107907244 106386733 106425672 110434697 102608322 100826556 107798967 107823355
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