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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5   4330285   uncharacterized LOC4330285 
 osa-r.6   4330285   uncharacterized LOC4330285 
 osa-m.8   4330285   uncharacterized LOC4330285 
 osa-e.1   4330285   uncharacterized LOC4330285 
 tae-r.2   123141635   uncharacterized LOC123141635 
 tae-r.2   123127975   uncharacterized LOC123127975 
 hvu-r.1   123401809   uncharacterized LOC123401809 
 bdi-r.1   100840316   uncharacterized LOC100840316 
 zma-u.5   100193056   DNA-directed RNA polymerase subunit 
 sbi-r.1   8076045   DNA-directed RNA polymerase III subunit RPC10 
 ath-u.5   AT4G07950   DNA-directed RNA polymerase, subunit M, archaeal 
 ath-u.5   AT1G01210   DNA-directed RNA polymerase, subunit M, archaeal 
 gma-u.5   100815164   DNA-directed RNA polymerase III subunit RPC10 
 gma-u.5   100527062   DNA-directed RNA polymerase III subunit RPC9a-like 
 sly-u.5   101257966   uncharacterized LOC101257966 
 bra-r.6   103840544   DNA-directed RNA polymerase III subunit RPC10 
 vvi-u.5   100243245   uncharacterized LOC100243245 
 ppo-u.5   7464273   uncharacterized LOC7464273 
 mtr-u.5   11431765   DNA-directed RNA polymerase III subunit RPC10 
 mtr-u.5   11429365   DNA-directed RNA polymerase III subunit RPC10 
 ghi-r.1   107944313   DNA-directed RNA polymerase III subunit RPC10 
 ghi-r.1   107930967   DNA-directed RNA polymerase III subunit RPC10 
 ghi-r.1   107900957   DNA-directed RNA polymerase III subunit RPC10 
 bna-r.1   106386893   DNA-directed RNA polymerase III subunit RPC10 
 bna-r.1   106364755   DNA-directed RNA polymerase III subunit RPC10 
 sot-r.1   102591104   DNA-directed RNA polymerase III subunit RPC10-like 
 nta-r.1   107762077   uncharacterized LOC107762077 
 nta-r.1   107800054   uncharacterized LOC107800054 
 cre-r.1   CHLRE_02g102400v5   uncharacterized protein 

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Top 50 coexpressed genes to 4330285 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4330285 (osa-u.5 coexpression data)

CoexMap"4330285"


osaLOC4330285 | Entrez gene ID : 4330285      
Species osa tae hvu bdi zma sbi ath gma sly bra vvi ppo mtr ghi bna sot nta cre cit
Paralog 4 2 1 1 1 1 2 2 1 1 1 1 2 3 2 1 2 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG osa03020 [list] [network] RNA polymerase (53 genes)
GO BP
GO:0006386 [list] [network] termination of RNA polymerase III transcription  (1 genes)  IEA  
GO:0006351 [list] [network] DNA-templated transcription  (227 genes)  IEA  
GO CC
GO:0005666 [list] [network] RNA polymerase III complex  (24 genes)  IEA  
GO MF
GO:0008270 [list] [network] zinc ion binding  (840 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (3512 genes)  IEA  
Protein XP_015625442.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  vacu 1  (predict for XP_015625442.1)
Subcellular
localization
TargetP
other 3  (predict for XP_015625442.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.5
for
4330285
osa-r.6
for
4330285
osa-m.8
for
4330285
osa-e.1
for
4330285
tae-r.2
for
123141635
tae-r.2
for
123127975
hvu-r.1
for
123401809
bdi-r.1
for
100840316
zma-u.5
for
100193056
sbi-r.1
for
8076045
ath-u.5
for
AT4G07950
ath-u.5
for
AT1G01210
gma-u.5
for
100815164
gma-u.5
for
100527062
sly-u.5
for
101257966
bra-r.6
for
103840544
vvi-u.5
for
100243245
ppo-u.5
for
7464273
mtr-u.5
for
11431765
mtr-u.5
for
11429365
ghi-r.1
for
107944313
ghi-r.1
for
107930967
ghi-r.1
for
107900957
bna-r.1
for
106386893
bna-r.1
for
106364755
sot-r.1
for
102591104
nta-r.1
for
107762077
nta-r.1
for
107800054
cre-r.1
for
CHLRE_02g102400v5


Ortholog ID: 6918
Species osa tae tae hvu bdi zma sbi ath ath gma gma sly bra vvi ppo mtr mtr ghi ghi ghi bna bna sot nta nta cre
Symbol LOC4330285 LOC123141635 LOC123127975 LOC123401809 LOC100840316 LOC100193056 LOC8076045 AT4G07950 AT1G01210 LOC100815164 LOC100527062 LOC101257966 LOC103840544 LOC100243245 LOC7464273 LOC11431765 LOC11429365 LOC107944313 LOC107930967 LOC107900957 LOC106364755 LOC106377365 LOC102591104 LOC107762077 LOC107800054 CHLRE_02g102400v5
Function* uncharacterized LOC4330285 uncharacterized LOC123141635 uncharacterized LOC123127975 uncharacterized LOC123401809 uncharacterized LOC100840316 DNA-directed RNA polymerase subunit DNA-directed RNA polymerase III subunit RPC10 DNA-directed RNA polymerase, subunit M, archaeal DNA-directed RNA polymerase, subunit M, archaeal DNA-directed RNA polymerase III subunit RPC10 DNA-directed RNA polymerase III subunit RPC9a-like uncharacterized LOC101257966 DNA-directed RNA polymerase III subunit RPC10 uncharacterized LOC100243245 uncharacterized LOC7464273 DNA-directed RNA polymerase III subunit RPC10 DNA-directed RNA polymerase III subunit RPC10 DNA-directed RNA polymerase III subunit RPC10 DNA-directed RNA polymerase III subunit RPC10 DNA-directed RNA polymerase III subunit RPC10 DNA-directed RNA polymerase III subunit RPC10 DNA-directed RNA polymerase III subunit RPC10 DNA-directed RNA polymerase III subunit RPC10-like uncharacterized LOC107762077 uncharacterized LOC107800054 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
tae03020 RNA polymerase 3
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
tae03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03030 DNA replication 2
hvu03410 Base excision repair 2
hvu03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 5
zma03040 Spliceosome 2
zma03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 3
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 2
ath03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 4
gma03008 Ribosome biogenesis in eukaryotes 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 4
gma04145 Phagosome 4
gma03010 Ribosome 2
gma04142 Lysosome 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 7
sly03018 RNA degradation 2
sly03040 Spliceosome 2
sly03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
bra03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00520 Amino sugar and nucleotide sugar metabolism 2
vvi01250 Biosynthesis of nucleotide sugars 2
vvi03040 Spliceosome 2
vvi03020 RNA polymerase 2
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03020 RNA polymerase 5
mtr03420 Nucleotide excision repair 2
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 3
mtr03010 Ribosome 2
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 4
bna00790 Folate biosynthesis 2
bna01240 Biosynthesis of cofactors 2
bna04122 Sulfur relay system 2
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 4
bna03082 ATP-dependent chromatin remodeling 2
bna00790 Folate biosynthesis 2
bna01240 Biosynthesis of cofactors 2
bna04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 13
sot03020 RNA polymerase 2
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03020 RNA polymerase 5
cre03008 Ribosome biogenesis in eukaryotes 4
cre03420 Nucleotide excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4330285 123141635 123127975 123401809 100840316 100193056 8076045 826299 839481 100815164 100527062 101257966 103840544 100243245 7464273 11431765 11429365 107944313 107930967 107900957 106364755 106377365 102591104 107762077 107800054 5725557
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