ATTED-II : GeneCoexpression result

Species	Gene	Description
osa-u.5	4332833	E3 ubiquitin-protein ligase SRFP1-like
osa-r.6	4332833	E3 ubiquitin-protein ligase SRFP1-like
osa-m.8	4332833	E3 ubiquitin-protein ligase SRFP1-like
osa-e.1	4332833	E3 ubiquitin-protein ligase SRFP1-like
osa-u.5	4352424	E3 ubiquitin-protein ligase MIEL1
zma-u.5	100282790	RING finger and CHY zinc finger domain-containing protein 1
ath-u.5	AT3G62970	zinc finger (C3HC4-type RING finger) family protein
ath-u.5	AT5G18650	CHY-type/CTCHY-type/RING-type Zinc finger protein
gma-u.5	100792038	RING finger and CHY zinc finger domain-containing protein 1-like
gma-u.5	100781566	E3 ubiquitin-protein ligase MIEL1
gma-u.5	100812839	RING finger and CHY zinc finger domain-containing protein 1-like
sly-u.5	101266831	E3 ubiquitin-protein ligase MIEL1
sly-u.5	101247534	E3 ubiquitin-protein ligase MIEL1
sly-u.5	101246466	E3 ubiquitin-protein ligase MIEL1
vvi-u.5	100264899	E3 ubiquitin-protein ligase MIEL1
vvi-u.5	100261415	E3 ubiquitin-protein ligase MIEL1
ppo-u.5	7481643	E3 ubiquitin-protein ligase MIEL1
ppo-u.5	7491321	E3 ubiquitin-protein ligase MIEL1
mtr-u.5	11446119	E3 ubiquitin-protein ligase MIEL1

Annotation

functional annotation

KEGG

osa04120 [list] [network] Ubiquitin mediated proteolysis (159 genes)

GO BP

GO CC

GO MF

GO:0008270 [list] [network] zinc ion binding

(840 genes)

IEA

Protein

XP_015628865.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 4, chlo 3, mito 2, cyto_nucl 2, cyto_pero 2, cyto_E.R. 2

(predict for XP_015628865.1)

Subcellular
localization
TargetP

other 7, mito 3

(predict for XP_015628865.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	osa-u.5 for 4332833	osa-r.6 for 4332833	osa-m.8 for 4332833	osa-e.1 for 4332833	osa-u.5 for 4352424	zma-u.5 for 100282790	ath-u.5 for AT3G62970	ath-u.5 for AT5G18650	gma-u.5 for 100792038	gma-u.5 for 100781566	gma-u.5 for 100812839	sly-u.5 for 101266831	sly-u.5 for 101247534	sly-u.5 for 101246466	vvi-u.5 for 100264899	vvi-u.5 for 100261415	ppo-u.5 for 7481643	ppo-u.5 for 7491321	mtr-u.5 for 11446119

Ortholog

Ortholog ID: 2658

Species

osa

tae

hvu

bdi

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

E3 ubiquitin-protein ligase SRFP1-like

E3 ubiquitin-protein ligase MIEL1

E3 ubiquitin-protein ligase SRFP1

E3 ubiquitin-protein ligase MIEL1-like

E3 ubiquitin-protein ligase MIEL1

E3 ubiquitin-protein ligase SRFP1

RING finger and CHY zinc finger domain-containing protein 1

E3 ubiquitin-protein ligase MIEL1

zinc finger (C3HC4-type RING finger) family protein

CHY-type/CTCHY-type/RING-type Zinc finger protein

RING finger and CHY zinc finger domain-containing protein 1-like

E3 ubiquitin-protein ligase MIEL1

E3 ubiquitin-protein ligase MIEL1-like

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00650	Butanoate metabolism	2
osa01200	Carbon metabolism	2
osa00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04144	Endocytosis	2
osa04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00592	alpha-Linolenic acid metabolism	3
tae04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03020	RNA polymerase	2
bdi03420	Nucleotide excision repair	2
bdi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04120	Ubiquitin mediated proteolysis	2
zma04148	Efferocytosis	2
zma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04120	Ubiquitin mediated proteolysis	2
ath00561	Glycerolipid metabolism	2
ath00270	Cysteine and methionine metabolism	2
ath00670	One carbon pool by folate	2
ath00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04120	Ubiquitin mediated proteolysis	2
gma00480	Glutathione metabolism	2
gma04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03008	Ribosome biogenesis in eukaryotes	4
vvi00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04120	Ubiquitin mediated proteolysis	5
bna00280	Valine, leucine and isoleucine degradation	4
bna00650	Butanoate metabolism	4
bna04146	Peroxisome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04120	Ubiquitin mediated proteolysis	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04120	Ubiquitin mediated proteolysis	6
nta00100	Steroid biosynthesis	3
nta00561	Glycerolipid metabolism	3
nta00564	Glycerophospholipid metabolism	3
nta00565	Ether lipid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03040	Spliceosome	5

Expression

Expression pattern

Entrez Gene ID^*

4332833

4352424

123091020

123086957

123396647

100828315

100836585

100282790

8066297

825472

831983

100812839

100812246

101246466

101247534

103249165

103845815

100261415

100264899

7481643

7491321

11446119

107893804

107913261

106375235

106371919

102600991

102579560

102629227

107806262

107806785

5729325

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 4332833 (osa-u.5 coexpression data)

Top 50 enrichment test to 4332833 (osa-u.5 coexpression data)


Species	osa	zma	ath	gma	sly	vvi	ppo	mtr	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	5	1	2	3	3	2	2	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 4332833 (osa-u.5 coexpression data)

Top 50 enrichment test to 4332833 (osa-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**