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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5   4332851   nucleolar protein 56 
 osa-r.6   4332851   nucleolar protein 56 
 osa-m.8   4332851   nucleolar protein 56 
 osa-e.1   4332851   nucleolar protein 56 
 tae-r.2   123043838   nucleolar protein 56 
 tae-r.2   123051703   nucleolar protein 56 
 tae-r.2   123051704   nucleolar protein 56 
 hvu-r.1   123449455   nucleolar protein 56-like 
 hvu-r.1   123424859   nucleolar protein 56-like 
 bdi-r.1   100831411   nucleolar protein 56 
 bdi-r.1   100822510   nucleolar protein 56 
 zma-u.5   103639131   nucleolar protein 56 
 zma-u.5   100283975   uncharacterized LOC100283975 
 sbi-r.1   8082289   nucleolar protein 56 
 sbi-r.1   8072268   nucleolar protein 56 
 ath-u.5   AT3G12860   NOP56-like pre RNA processing ribonucleoprotein 
 ath-u.5   NOP56   NOP56-like pre RNA processing ribonucleoprotein 
 gma-u.5   100779446   nucleolar protein 56 
 gma-u.5   100815506   nucleolar protein 56 
 gma-u.5   100794470   nucleolar protein 56 
 sly-u.5   101250547   nucleolar protein 56 
 bra-r.6   103832537   nucleolar protein 56-like 
 bra-r.6   103849056   nucleolar protein 56 
 vvi-u.5   100267928   nucleolar protein 56 
 ppo-u.5   7454698   nucleolar protein 56 
 ppo-u.5   7454542   nucleolar protein 56 
 mtr-u.5   11407456   nucleolar protein 56 
 ghi-r.1   121219320   nucleolar protein 56 
 ghi-r.1   107941045   nucleolar protein 56 
 ghi-r.1   107924418   nucleolar protein 56 
 bna-r.1   106353127   nucleolar protein 56-like 
 bna-r.1   106354114   nucleolar protein 56 
 sot-r.1   102580709   nucleolar protein 56-like 
 cit-r.1   102628911   nucleolar protein 56-like 
 nta-r.1   107763606   nucleolar protein 56 
 nta-r.1   107763939   nucleolar protein 56-like 
 nta-r.1   107796991   nucleolar protein 56 
 cre-r.1   CHLRE_12g525200v5   uncharacterized protein 

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Top 50 coexpressed genes to 4332851 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4332851 (osa-u.5 coexpression data)

CoexMap"4332851"


osaLOC4332851 | Entrez gene ID : 4332851      
Species osa tae hvu bdi zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 4 3 2 2 2 2 2 3 1 2 1 2 1 3 2 1 1 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG osa03008 [list] [network] Ribosome biogenesis in eukaryotes (91 genes)
GO BP
GO CC
GO:0031428 [list] [network] box C/D methylation guide snoRNP complex  (14 genes)  IEA  
GO:0032040 [list] [network] small-subunit processome  (47 genes)  IEA  
GO MF
GO:0030515 [list] [network] snoRNA binding  (25 genes)  IEA  
Protein XP_015631370.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 4,  cyto 1  (predict for XP_015631370.1)
Subcellular
localization
TargetP
other 5,  scret 3  (predict for XP_015631370.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.5
for
4332851
osa-r.6
for
4332851
osa-m.8
for
4332851
osa-e.1
for
4332851
tae-r.2
for
123043838
tae-r.2
for
123051703
tae-r.2
for
123051704
hvu-r.1
for
123449455
hvu-r.1
for
123424859
bdi-r.1
for
100831411
bdi-r.1
for
100822510
zma-u.5
for
103639131
zma-u.5
for
100283975
sbi-r.1
for
8082289
sbi-r.1
for
8072268
ath-u.5
for
AT3G12860
ath-u.5
for
NOP56
gma-u.5
for
100779446
gma-u.5
for
100815506
gma-u.5
for
100794470
sly-u.5
for
101250547
bra-r.6
for
103832537
bra-r.6
for
103849056
vvi-u.5
for
100267928
ppo-u.5
for
7454698
ppo-u.5
for
7454542
mtr-u.5
for
11407456
ghi-r.1
for
121219320
ghi-r.1
for
107941045
ghi-r.1
for
107924418
bna-r.1
for
106353127
bna-r.1
for
106354114
sot-r.1
for
102580709
cit-r.1
for
102628911
nta-r.1
for
107763606
nta-r.1
for
107763939
nta-r.1
for
107796991
cre-r.1
for
CHLRE_12g525200v5


Ortholog ID: 3450
Species osa tae tae tae hvu hvu bdi bdi zma zma sbi sbi ath ath gma gma gma sly bra bra vvi ppo ppo mtr ghi ghi ghi bna bna bna sot cit nta nta nta cre
Symbol LOC4332851 LOC123066934 LOC123187614 LOC123182958 LOC123449455 LOC123424859 LOC100831411 LOC100822510 LOC103639131 LOC100283975 LOC8082289 LOC8072268 AT3G12860 NOP56 LOC100779446 LOC100815506 LOC100794470 LOC101250547 LOC103849056 LOC103859472 LOC100267928 LOC7454698 LOC7454542 LOC11407456 LOC107941045 LOC107924418 LOC107912088 LOC106354114 LOC106429072 LOC106436725 LOC102580709 LOC102628911 LOC107763606 LOC107763939 LOC107825975 CHLRE_12g525200v5
Function* nucleolar protein 56 nucleolar protein 56 nucleolar protein 56 nucleolar protein 56 nucleolar protein 56-like nucleolar protein 56-like nucleolar protein 56 nucleolar protein 56 nucleolar protein 56 uncharacterized LOC100283975 nucleolar protein 56 nucleolar protein 56 NOP56-like pre RNA processing ribonucleoprotein NOP56-like pre RNA processing ribonucleoprotein nucleolar protein 56 nucleolar protein 56 nucleolar protein 56 nucleolar protein 56 nucleolar protein 56 nucleolar protein 56 nucleolar protein 56 nucleolar protein 56 nucleolar protein 56 nucleolar protein 56 nucleolar protein 56 nucleolar protein 56 nucleolar protein 56 nucleolar protein 56 nucleolar protein 56-like nucleolar protein 56 nucleolar protein 56-like nucleolar protein 56-like nucleolar protein 56 nucleolar protein 56-like nucleolar protein 56-like uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00290 Valine, leucine and isoleucine biosynthesis 9
tae01210 2-Oxocarboxylic acid metabolism 9
tae01230 Biosynthesis of amino acids 9
tae00660 C5-Branched dibasic acid metabolism 6
tae00966 Glucosinolate biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 6
hvu03018 RNA degradation 2
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 6
gma03013 Nucleocytoplasmic transport 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 8
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
bna03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 7
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 8
nta03010 Ribosome 3
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 9
nta03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 8
nta03010 Ribosome 3
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4332851 123066934 123187614 123182958 123449455 123424859 100831411 100822510 103639131 100283975 8082289 8072268 820468 842063 100779446 100815506 100794470 101250547 103849056 103859472 100267928 7454698 7454542 11407456 107941045 107924418 107912088 106354114 106429072 106436725 102580709 102628911 107763606 107763939 107825975 5722505
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