ATTED-II : GeneCoexpression result

Species	Gene	Description
osa-u.5	4334609	uncharacterized LOC4334609
osa-r.6	4334609	uncharacterized LOC4334609
osa-m.8	4334609	uncharacterized LOC4334609
osa-e.1	4334609	uncharacterized LOC4334609
tae-r.2	123126009	ribosomal RNA large subunit methyltransferase E
tae-r.2	123117510	ribosomal RNA large subunit methyltransferase E
tae-r.2	123108236	ribosomal RNA large subunit methyltransferase E
hvu-r.1	123399259	ribosomal RNA large subunit methyltransferase E
bdi-r.1	100834173	ribosomal RNA large subunit methyltransferase E
zma-u.5	103644257	rRNA large subunit methyltransferase E
sbi-r.1	8057356	ribosomal RNA large subunit methyltransferase E
gma-u.5	100805818	ribosomal RNA large subunit methyltransferase E
vvi-u.5	100247875	uncharacterized LOC100247875
ppo-u.5	7489566	uncharacterized LOC7489566
mtr-u.5	11442144	ribosomal RNA large subunit methyltransferase E
ghi-r.1	107955133	ribosomal RNA large subunit methyltransferase E
ghi-r.1	107940400	ribosomal RNA large subunit methyltransferase E
cit-r.1	102621136	uncharacterized LOC102621136
nta-r.1	107783708	uncharacterized LOC107783708
cre-r.1	CHLRE_06g302650v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO:0001510 [list] [network] RNA methylation

(57 genes)

IEA

GO CC

GO MF

GO:0008650 [list] [network] rRNA (uridine-2'-O-)-methyltransferase activity

(3 genes)

IEA

Protein

XP_015632965.1 [sequence] [blastp]
XP_015632966.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 6, nucl 1, cyto 1, cyto_nucl 1	(predict for XP_015632965.1)
chlo 6, cyto 2, nucl 1, extr 1	(predict for XP_015632966.1)

Subcellular
localization
TargetP

other 8, mito 5	(predict for XP_015632965.1)
other 8, mito 5	(predict for XP_015632966.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	osa-u.5 for 4334609	osa-r.6 for 4334609	osa-m.8 for 4334609	osa-e.1 for 4334609	tae-r.2 for 123126009	tae-r.2 for 123117510	tae-r.2 for 123108236	hvu-r.1 for 123399259	bdi-r.1 for 100834173	zma-u.5 for 103644257	sbi-r.1 for 8057356	gma-u.5 for 100805818	vvi-u.5 for 100247875	ppo-u.5 for 7489566	mtr-u.5 for 11442144	ghi-r.1 for 107955133	ghi-r.1 for 107940400	cit-r.1 for 102621136	nta-r.1 for 107783708	cre-r.1 for CHLRE_06g302650v5

Ortholog

Ortholog ID: 11734

Species

osa

tae

hvu

bdi

zma

sbi

gma

vvi

ppo

mtr

ghi

cit

nta

cre

Symbol

Function^*

uncharacterized LOC4334609

ribosomal RNA large subunit methyltransferase E

rRNA large subunit methyltransferase E

ribosomal RNA large subunit methyltransferase E

uncharacterized LOC100247875

uncharacterized LOC7489566

ribosomal RNA large subunit methyltransferase E

uncharacterized LOC102621136

uncharacterized LOC107783708

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03008	Ribosome biogenesis in eukaryotes	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03008	Ribosome biogenesis in eukaryotes	10
bdi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	2
zma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03022	Basal transcription factors	3
mtr03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03008	Ribosome biogenesis in eukaryotes	4
ghi03040	Spliceosome	4
ghi03010	Ribosome	2
ghi03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03008	Ribosome biogenesis in eukaryotes	4
ghi03040	Spliceosome	4
ghi03010	Ribosome	2
ghi03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	5
cit03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03008	Ribosome biogenesis in eukaryotes	4
cre03020	RNA polymerase	3

Expression

Expression pattern

Entrez Gene ID^*

4334609

123126009

123117510

123108236

123399259

100834173

103644257

8057356

100805818

100247875

7489566

11442144

107955133

107940400

102621136

107783708

5716945

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 4334609 (osa-u.5 coexpression data)

Top 50 enrichment test to 4334609 (osa-u.5 coexpression data)


Species	osa	tae	hvu	bdi	zma	sbi	gma	vvi	ppo	mtr	ghi	cit	nta	cre	sly	bna	ath	sot	bra
Paralog	4	3	1	1	1	1	1	1	1	1	2	1	1	1	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 4334609 (osa-u.5 coexpression data)

Top 50 enrichment test to 4334609 (osa-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**