ATTED-II : GeneCoexpression result

Species	Gene	Description
osa-u.5	4334825	uncharacterized LOC4334825
osa-r.6	4334825	uncharacterized LOC4334825
osa-m.8	4334825	uncharacterized LOC4334825
osa-e.1	4334825	uncharacterized LOC4334825
zma-u.5	100272319	uncharacterized LOC100272319
ath-u.5	AT5G46840	RNA-binding (RRM/RBD/RNP motifs) family protein
gma-u.5	100809622	RNA-binding protein 34
gma-u.5	100784494	nucleolar protein 12
sly-u.5	101252314	nucleolar protein 12
vvi-u.5	100266124	uncharacterized LOC100266124
ppo-u.5	18094148	uncharacterized LOC18094148
ppo-u.5	7456083	uncharacterized LOC7456083
mtr-u.5	11434958	nucleolar protein 12

functional annotation

KEGG

GO BP

GO CC

GO:0005730 [list] [network] nucleolus

(202 genes)

IEA

GO MF

GO:0003723 [list] [network] RNA binding

(1223 genes)

IEA

Protein

XP_015630422.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 10

(predict for XP_015630422.1)

Subcellular
localization
TargetP

other 6, chlo 3

(predict for XP_015630422.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	osa-u.5 for 4334825	osa-r.6 for 4334825	osa-m.8 for 4334825	osa-e.1 for 4334825	zma-u.5 for 100272319	ath-u.5 for AT5G46840	gma-u.5 for 100809622	gma-u.5 for 100784494	sly-u.5 for 101252314	vvi-u.5 for 100266124	ppo-u.5 for 18094148	ppo-u.5 for 7456083	mtr-u.5 for 11434958

Ortholog ID: 9147

Species

osa

tae

hvu

bdi

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

uncharacterized LOC4334825

nucleolar protein 12

RNA-binding protein 34

uncharacterized LOC100272319

RNA-binding protein 34

RNA-binding (RRM/RBD/RNP motifs) family protein

nucleolar protein 12

RNA-binding protein 34

nucleolar protein 12

uncharacterized LOC100266124

uncharacterized LOC18094148

uncharacterized LOC7456083

nucleolar protein 12

RNA-binding protein 34

nucleolar protein 12

RNA-binding protein 34-like

nucleolar protein 12

uncharacterized LOC102629162

uncharacterized LOC107825167

uncharacterized LOC107794415

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03040	Spliceosome	5
bdi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	4
zma03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03008	Ribosome biogenesis in eukaryotes	4
sly03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03040	Spliceosome	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03008	Ribosome biogenesis in eukaryotes	3
sot03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03250	Viral life cycle - HIV-1	2
nta04120	Ubiquitin mediated proteolysis	2
nta04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03050	Proteasome	2
nta04120	Ubiquitin mediated proteolysis	2
nta04141	Protein processing in endoplasmic reticulum	2

Expression

Expression pattern

Entrez Gene ID^*

4334825

123087507

123114418

123395191

100838851

100272319

8060850

834728

100784494

100809622

101252314

103827700

100266124

18094148

7456083

11434958

107946758

107946681

106401951

102605654

102629162

107825167

107794415

66056561

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 4334825 (osa-u.5 coexpression data)

Top 50 enrichment test to 4334825 (osa-u.5 coexpression data)


Species	osa	zma	ath	gma	sly	vvi	ppo	mtr	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	4	1	1	2	1	1	2	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 4334825 (osa-u.5 coexpression data)

Top 50 enrichment test to 4334825 (osa-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**