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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5   4336309   uncharacterized LOC4336309 
 osa-r.6   4336309   uncharacterized LOC4336309 
 osa-m.8   4336309   uncharacterized LOC4336309 
 osa-e.1   4336309   uncharacterized LOC4336309 
 osa-u.5   4341682   uncharacterized LOC4341682 
 tae-r.2   123053805   probable GMP synthase [glutamine-hydrolyzing] 
 tae-r.2   123045938   probable GMP synthase [glutamine-hydrolyzing] 
 hvu-r.1   123427150   probable GMP synthase [glutamine-hydrolyzing] 
 hvu-r.1   123410964   uncharacterized LOC123410964 
 bdi-r.1   100824759   uncharacterized LOC100824759 
 bdi-r.1   100841287   uncharacterized LOC100841287 
 zma-u.5   103632764   probable GMP synthase [glutamine-hydrolyzing] 
 zma-u.5   103641812   DNA glycosylase superfamily protein 
 zma-u.5   100273848   DNA-3-methyladenine glycosylase I 
 sbi-r.1   8075892   probable GMP synthase [glutamine-hydrolyzing] 
 sbi-r.1   8058425   probable GMP synthase [glutamine-hydrolyzing] 
 ath-u.5   AT5G57970   DNA glycosylase superfamily protein 
 ath-u.5   AT1G15970   DNA glycosylase superfamily protein 
 ath-u.5   AT1G80850   DNA glycosylase superfamily protein 
 gma-u.5   100785912   probable GMP synthase [glutamine-hydrolyzing] 
 gma-u.5   100801026   probable GMP synthase [glutamine-hydrolyzing] 
 gma-u.5   100805836   probable GMP synthase [glutamine-hydrolyzing] 
 sly-u.5   101247118   uncharacterized LOC101247118 
 sly-u.5   101267869   uncharacterized LOC101267869 
 bra-r.6   103832451   DNA-3-methyladenine glycosylase 1 
 bra-r.6   103836010   probable GMP synthase [glutamine-hydrolyzing] 
 bra-r.6   103830461   probable GMP synthase [glutamine-hydrolyzing] 
 vvi-u.5   100267363   uncharacterized LOC100267363 
 vvi-u.5   100258710   uncharacterized LOC100258710 
 ppo-u.5   7465959   uncharacterized LOC7465959 
 ppo-u.5   7493231   uncharacterized LOC7493231 
 ppo-u.5   7493396   uncharacterized LOC7493396 
 mtr-u.5   11433926   probable GMP synthase [glutamine-hydrolyzing] 
 mtr-u.5   11439558   probable GMP synthase [glutamine-hydrolyzing] 
 ghi-r.1   121229252   probable GMP synthase [glutamine-hydrolyzing] 
 ghi-r.1   107961663   probable GMP synthase [glutamine-hydrolyzing] 
 ghi-r.1   107906887   DNA-3-methyladenine glycosylase 1 
 bna-r.1   106353385   DNA-3-methyladenine glycosylase 1-like 
 bna-r.1   106402818   DNA-3-methyladenine glycosylase 1 
 bna-r.1   106430770   DNA-3-methyladenine glycosylase 1-like 
 sot-r.1   102595001   probable GMP synthase [glutamine-hydrolyzing] 
 sot-r.1   102594169   uncharacterized LOC102594169 
 cit-r.1   102607933   uncharacterized LOC102607933 
 nta-r.1   107801000   uncharacterized LOC107801000 
 nta-r.1   107780907   uncharacterized LOC107780907 
 nta-r.1   107801558   uncharacterized LOC107801558 

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Top 50 coexpressed genes to 4336309 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4336309 (osa-u.5 coexpression data)

CoexMap"4336309"


osaLOC4336309 | Entrez gene ID : 4336309      
Species osa tae hvu bdi zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 5 2 2 2 3 2 3 3 2 3 2 3 2 3 3 2 1 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG osa03410 [list] [network] Base excision repair (50 genes)
GO BP
GO:0006284 [list] [network] base-excision repair  (29 genes)  IEA  
GO CC
GO MF
GO:0008725 [list] [network] DNA-3-methyladenine glycosylase activity  (8 genes)  IEA  
Protein XP_015634000.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  chlo 2  (predict for XP_015634000.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_015634000.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.5
for
4336309
osa-r.6
for
4336309
osa-m.8
for
4336309
osa-e.1
for
4336309
osa-u.5
for
4341682
tae-r.2
for
123053805
tae-r.2
for
123045938
hvu-r.1
for
123427150
hvu-r.1
for
123410964
bdi-r.1
for
100824759
bdi-r.1
for
100841287
zma-u.5
for
103632764
zma-u.5
for
103641812
zma-u.5
for
100273848
sbi-r.1
for
8075892
sbi-r.1
for
8058425
ath-u.5
for
AT5G57970
ath-u.5
for
AT1G15970
ath-u.5
for
AT1G80850
gma-u.5
for
100785912
gma-u.5
for
100801026
gma-u.5
for
100805836
sly-u.5
for
101247118
sly-u.5
for
101267869
bra-r.6
for
103832451
bra-r.6
for
103836010
bra-r.6
for
103830461
vvi-u.5
for
100267363
vvi-u.5
for
100258710
ppo-u.5
for
7465959
ppo-u.5
for
7493231
ppo-u.5
for
7493396
mtr-u.5
for
11433926
mtr-u.5
for
11439558
ghi-r.1
for
121229252
ghi-r.1
for
107961663
ghi-r.1
for
107906887
bna-r.1
for
106353385
bna-r.1
for
106402818
bna-r.1
for
106430770
sot-r.1
for
102595001
sot-r.1
for
102594169
cit-r.1
for
102607933
nta-r.1
for
107801000
nta-r.1
for
107780907
nta-r.1
for
107801558


Ortholog ID: 2512
Species osa osa tae hvu hvu bdi bdi zma zma zma sbi sbi ath ath ath gma gma gma sly sly bra bra bra vvi vvi ppo ppo ppo mtr mtr ghi ghi ghi bna bna bna sot sot cit nta nta nta
Symbol LOC4336309 LOC4341682 LOC123045938 LOC123427150 LOC123410964 LOC100824759 LOC100841287 LOC103632764 LOC100273848 LOC100216672 LOC8075892 LOC8058425 AT5G57970 AT1G15970 AT1G80850 LOC100801026 LOC100814780 LOC100783263 LOC101247118 LOC101267869 LOC103832451 LOC103836010 LOC103830461 LOC100267363 LOC100258710 LOC7465959 LOC7493231 LOC7493396 LOC11433926 LOC11439558 LOC107961663 LOC107906887 LOC107888426 LOC106402818 LOC106430770 LOC106387579 LOC102595001 LOC102594169 LOC102607933 LOC107801000 LOC107780907 LOC107788881
Function* uncharacterized LOC4336309 uncharacterized LOC4341682 probable GMP synthase [glutamine-hydrolyzing] probable GMP synthase [glutamine-hydrolyzing] uncharacterized LOC123410964 uncharacterized LOC100824759 uncharacterized LOC100841287 probable GMP synthase [glutamine-hydrolyzing] DNA-3-methyladenine glycosylase I DNA glycosylase superfamily protein probable GMP synthase [glutamine-hydrolyzing] probable GMP synthase [glutamine-hydrolyzing] DNA glycosylase superfamily protein DNA glycosylase superfamily protein DNA glycosylase superfamily protein probable GMP synthase [glutamine-hydrolyzing] uncharacterized LOC100814780 probable GMP synthase [glutamine-hydrolyzing] uncharacterized LOC101247118 uncharacterized LOC101267869 DNA-3-methyladenine glycosylase 1 probable GMP synthase [glutamine-hydrolyzing] probable GMP synthase [glutamine-hydrolyzing] uncharacterized LOC100267363 uncharacterized LOC100258710 uncharacterized LOC7465959 uncharacterized LOC7493231 uncharacterized LOC7493396 probable GMP synthase [glutamine-hydrolyzing] probable GMP synthase [glutamine-hydrolyzing] probable GMP synthase [glutamine-hydrolyzing] DNA-3-methyladenine glycosylase 1 uncharacterized LOC107888426 DNA-3-methyladenine glycosylase 1 DNA-3-methyladenine glycosylase 1-like uncharacterized LOC106387579 probable GMP synthase [glutamine-hydrolyzing] uncharacterized LOC102594169 uncharacterized LOC102607933 uncharacterized LOC107801000 uncharacterized LOC107780907 uncharacterized LOC107788881
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03410 Base excision repair 3
tae03015 mRNA surveillance pathway 2
tae04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 2
hvu03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04145 Phagosome 2
hvu04517 IgSF CAM signaling 2
hvu04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 4
sbi00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00010 Glycolysis / Gluconeogenesis 3
ath01200 Carbon metabolism 3
ath01240 Biosynthesis of cofactors 2
ath00030 Pentose phosphate pathway 2
ath00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
gma03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03410 Base excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03410 Base excision repair 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03410 Base excision repair 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03410 Base excision repair 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03410 Base excision repair 4
bna00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03410 Base excision repair 4
bna00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03410 Base excision repair 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00510 N-Glycan biosynthesis 2
cit00513 Various types of N-glycan biosynthesis 2
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 4
nta03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
nta03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta03410 Base excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4336309 4341682 123045938 123427150 123410964 100824759 100841287 103632764 100273848 100216672 8075892 8058425 835908 838167 844424 100801026 100814780 100783263 101247118 101267869 103832451 103836010 103830461 100267363 100258710 7465959 7493231 7493396 11433926 11439558 107961663 107906887 107888426 106402818 106430770 106387579 102595001 102594169 102607933 107801000 107780907 107788881
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