ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
osa-u.5	4337051	aminomethyltransferase, mitochondrial
osa-r.6	4337051	aminomethyltransferase, mitochondrial
osa-m.8	4337051	aminomethyltransferase, mitochondrial
osa-e.1	4337051	aminomethyltransferase, mitochondrial
tae-r.2	123190483	aminomethyltransferase, mitochondrial
tae-r.2	123054633	aminomethyltransferase, mitochondrial
tae-r.2	123046778	aminomethyltransferase, mitochondrial
hvu-r.1	123427785	aminomethyltransferase, mitochondrial
bdi-r.1	100824957	aminomethyltransferase, mitochondrial
zma-u.5	100279332	uncharacterized LOC100279332
sbi-r.1	8066805	aminomethyltransferase, mitochondrial
ath-u.5	AT1G11860	Glycine cleavage T-protein family
gma-u.5	100809241	aminomethyltransferase, mitochondrial
gma-u.5	100804288	aminomethyltransferase, mitochondrial
gma-u.5	100800509	aminomethyltransferase, mitochondrial
sly-u.5	101249137	aminomethyltransferase, mitochondrial
bra-r.6	103843220	aminomethyltransferase, mitochondrial
bra-r.6	103836204	aminomethyltransferase, mitochondrial
vvi-u.5	100250401	aminomethyltransferase, mitochondrial
ppo-u.5	18111215	aminomethyltransferase, mitochondrial
ppo-u.5	18097363	aminomethyltransferase, mitochondrial
mtr-u.5	11437303	aminomethyltransferase, mitochondrial
ghi-r.1	107900587	aminomethyltransferase, mitochondrial
ghi-r.1	107962001	aminomethyltransferase, mitochondrial
ghi-r.1	107958283	aminomethyltransferase, mitochondrial
bna-r.1	106415143	aminomethyltransferase, mitochondrial
bna-r.1	106362172	aminomethyltransferase, mitochondrial
bna-r.1	106435836	aminomethyltransferase, mitochondrial-like
sot-r.1	102602939	aminomethyltransferase, mitochondrial-like
cit-r.1	102624724	aminomethyltransferase, mitochondrial
nta-r.1	107805971	aminomethyltransferase, mitochondrial
nta-r.1	107783755	aminomethyltransferase, mitochondrial
cre-r.1	CHLRE_03g193750v5	uncharacterized protein

Top 50 coexpressed genes to 4337051 (osa-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 4337051 (osa-u.5 coexpression data)

CoexMap"4337051"

[Cytoscape]

Annotation

functional annotation

KEGG

osa00260 [list] [network] Glycine, serine and threonine metabolism (66 genes)

osa00630 [list] [network] Glyoxylate and dicarboxylate metabolism (77 genes)

osa00670 [list] [network] One carbon pool by folate (38 genes)

osa00785 [list] [network] Lipoic acid metabolism (36 genes)

osa01200 [list] [network] Carbon metabolism (276 genes)

GO BP

GO:0006546 [list] [network] glycine catabolic process

(7 genes)

IEA

GO CC

GO:0005739 [list] [network] mitochondrion

(607 genes)

IEA

GO MF

GO:0004047 [list] [network] aminomethyltransferase activity	(1 genes)	IEA
GO:0005515 [list] [network] protein binding	(4590 genes)	IEA

Protein

XP_015635501.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 6, mito 4

(predict for XP_015635501.1)

Subcellular
localization
TargetP

mito 9

(predict for XP_015635501.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	osa-u.5 for 4337051	osa-r.6 for 4337051	osa-m.8 for 4337051	osa-e.1 for 4337051	tae-r.2 for 123190483	tae-r.2 for 123054633	tae-r.2 for 123046778	hvu-r.1 for 123427785	bdi-r.1 for 100824957	zma-u.5 for 100279332	sbi-r.1 for 8066805	ath-u.5 for AT1G11860	gma-u.5 for 100809241	gma-u.5 for 100804288	gma-u.5 for 100800509	sly-u.5 for 101249137	bra-r.6 for 103843220	bra-r.6 for 103836204	vvi-u.5 for 100250401	ppo-u.5 for 18111215	ppo-u.5 for 18097363	mtr-u.5 for 11437303	ghi-r.1 for 107900587	ghi-r.1 for 107962001	ghi-r.1 for 107958283	bna-r.1 for 106415143	bna-r.1 for 106362172	bna-r.1 for 106435836	sot-r.1 for 102602939	cit-r.1 for 102624724	nta-r.1 for 107805971	nta-r.1 for 107783755	cre-r.1 for CHLRE_03g193750v5

Ortholog

Ortholog ID: 6697

Species

osa

tae

hvu

bdi

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

aminomethyltransferase, mitochondrial

uncharacterized LOC100279332

aminomethyltransferase, mitochondrial

Glycine cleavage T-protein family

aminomethyltransferase, mitochondrial

aminomethyltransferase, mitochondrial-like

aminomethyltransferase, mitochondrial

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa01200	Carbon metabolism	8
osa00630	Glyoxylate and dicarboxylate metabolism	6
osa01230	Biosynthesis of amino acids	5
osa00260	Glycine, serine and threonine metabolism	5
osa00710	Carbon fixation by Calvin cycle	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00630	Glyoxylate and dicarboxylate metabolism	5
tae00260	Glycine, serine and threonine metabolism	4
tae00670	One carbon pool by folate	4
tae00785	Lipoic acid metabolism	4
tae01200	Carbon metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00630	Glyoxylate and dicarboxylate metabolism	7
tae00260	Glycine, serine and threonine metabolism	4
tae00670	One carbon pool by folate	4
tae00785	Lipoic acid metabolism	4
tae01200	Carbon metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00630	Glyoxylate and dicarboxylate metabolism	4
tae00260	Glycine, serine and threonine metabolism	3
tae00670	One carbon pool by folate	3
tae00785	Lipoic acid metabolism	3
tae01200	Carbon metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01200	Carbon metabolism	10
hvu00710	Carbon fixation by Calvin cycle	6
hvu00630	Glyoxylate and dicarboxylate metabolism	6
hvu00195	Photosynthesis	3
hvu00260	Glycine, serine and threonine metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01200	Carbon metabolism	5
bdi00195	Photosynthesis	4
bdi00710	Carbon fixation by Calvin cycle	3
bdi00190	Oxidative phosphorylation	2
bdi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma01230	Biosynthesis of amino acids	7
zma01200	Carbon metabolism	7
zma00630	Glyoxylate and dicarboxylate metabolism	5
zma00710	Carbon fixation by Calvin cycle	4
zma00260	Glycine, serine and threonine metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi01200	Carbon metabolism	6
sbi01230	Biosynthesis of amino acids	5
sbi00030	Pentose phosphate pathway	4
sbi00710	Carbon fixation by Calvin cycle	3
sbi00260	Glycine, serine and threonine metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath01200	Carbon metabolism	10
ath00630	Glyoxylate and dicarboxylate metabolism	6
ath00260	Glycine, serine and threonine metabolism	5
ath00670	One carbon pool by folate	5
ath00710	Carbon fixation by Calvin cycle	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma01200	Carbon metabolism	4
gma00260	Glycine, serine and threonine metabolism	3
gma00630	Glyoxylate and dicarboxylate metabolism	3
gma00670	One carbon pool by folate	3
gma00785	Lipoic acid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00260	Glycine, serine and threonine metabolism	4
gma00630	Glyoxylate and dicarboxylate metabolism	4
gma00670	One carbon pool by folate	4
gma00785	Lipoic acid metabolism	4
gma01200	Carbon metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma01200	Carbon metabolism	3
gma00910	Nitrogen metabolism	2
gma00260	Glycine, serine and threonine metabolism	2
gma00630	Glyoxylate and dicarboxylate metabolism	2
gma00670	One carbon pool by folate	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00630	Glyoxylate and dicarboxylate metabolism	7
sly01200	Carbon metabolism	7
sly00260	Glycine, serine and threonine metabolism	3
sly00710	Carbon fixation by Calvin cycle	3
sly01230	Biosynthesis of amino acids	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra01200	Carbon metabolism	8
bra01230	Biosynthesis of amino acids	6
bra00630	Glyoxylate and dicarboxylate metabolism	5
bra00785	Lipoic acid metabolism	4
bra00010	Glycolysis / Gluconeogenesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra01200	Carbon metabolism	9
bra01230	Biosynthesis of amino acids	7
bra00630	Glyoxylate and dicarboxylate metabolism	6
bra00010	Glycolysis / Gluconeogenesis	5
bra00710	Carbon fixation by Calvin cycle	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi01200	Carbon metabolism	5
vvi00710	Carbon fixation by Calvin cycle	4
vvi00195	Photosynthesis	3
vvi00630	Glyoxylate and dicarboxylate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01200	Carbon metabolism	10
ppo00710	Carbon fixation by Calvin cycle	8
ppo01230	Biosynthesis of amino acids	7
ppo00030	Pentose phosphate pathway	4
ppo00630	Glyoxylate and dicarboxylate metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00670	One carbon pool by folate	10
ppo01230	Biosynthesis of amino acids	8
ppo00270	Cysteine and methionine metabolism	7
ppo01200	Carbon metabolism	6
ppo01240	Biosynthesis of cofactors	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr01200	Carbon metabolism	6
mtr00630	Glyoxylate and dicarboxylate metabolism	4
mtr00710	Carbon fixation by Calvin cycle	3
mtr01230	Biosynthesis of amino acids	3
mtr00260	Glycine, serine and threonine metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi01200	Carbon metabolism	6
ghi00260	Glycine, serine and threonine metabolism	4
ghi00630	Glyoxylate and dicarboxylate metabolism	4
ghi00670	One carbon pool by folate	4
ghi00785	Lipoic acid metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00260	Glycine, serine and threonine metabolism	4
ghi00630	Glyoxylate and dicarboxylate metabolism	4
ghi00670	One carbon pool by folate	4
ghi00785	Lipoic acid metabolism	4
ghi01200	Carbon metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00260	Glycine, serine and threonine metabolism	4
ghi00630	Glyoxylate and dicarboxylate metabolism	4
ghi00670	One carbon pool by folate	4
ghi00785	Lipoic acid metabolism	4
ghi01200	Carbon metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00260	Glycine, serine and threonine metabolism	4
bna00630	Glyoxylate and dicarboxylate metabolism	4
bna00670	One carbon pool by folate	4
bna00785	Lipoic acid metabolism	4
bna01200	Carbon metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00260	Glycine, serine and threonine metabolism	4
bna00630	Glyoxylate and dicarboxylate metabolism	4
bna00670	One carbon pool by folate	4
bna00785	Lipoic acid metabolism	4
bna01200	Carbon metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00260	Glycine, serine and threonine metabolism	4
bna00630	Glyoxylate and dicarboxylate metabolism	4
bna00670	One carbon pool by folate	4
bna00785	Lipoic acid metabolism	4
bna01200	Carbon metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01200	Carbon metabolism	9
sot00710	Carbon fixation by Calvin cycle	8
sot01230	Biosynthesis of amino acids	7
sot00010	Glycolysis / Gluconeogenesis	3
sot00030	Pentose phosphate pathway	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit01200	Carbon metabolism	4
cit01230	Biosynthesis of amino acids	3
cit03010	Ribosome	3
cit00710	Carbon fixation by Calvin cycle	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00630	Glyoxylate and dicarboxylate metabolism	12
nta01200	Carbon metabolism	10
nta00260	Glycine, serine and threonine metabolism	8
nta00710	Carbon fixation by Calvin cycle	6
nta00220	Arginine biosynthesis	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00630	Glyoxylate and dicarboxylate metabolism	12
nta01200	Carbon metabolism	10
nta00260	Glycine, serine and threonine metabolism	8
nta00710	Carbon fixation by Calvin cycle	6
nta00220	Arginine biosynthesis	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00260	Glycine, serine and threonine metabolism	5
cre00630	Glyoxylate and dicarboxylate metabolism	5
cre01200	Carbon metabolism	5
cre00670	One carbon pool by folate	3
cre01230	Biosynthesis of amino acids	2

Expression

Expression pattern

Entrez Gene ID^*

4337051

123190483

123054633

123046778

123427785

100824957

100279332

8066805

837733

100809241

100804288

100778188

101249137

103843220

103836204

100250401

18111215

18097363

11437303

107962001

107958283

107905916

106415143

106362172

106413869

102602939

102624724

107805971

107783755

5718707

The preparation time of this page was 0.1 [sec].


Species	osa	tae	hvu	bdi	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	4	3	1	1	1	1	1	3	1	2	1	2	1	3	3	1	1	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 4337051 (osa-u.5 coexpression data)

Top 50 enrichment test to 4337051 (osa-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**