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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-m.8   4341389   pectate lyase 
 osa-e.1   4341389   pectate lyase 
 osa-u.5   4340105   pectate lyase 
 osa-u.5   4340099   pectate lyase 
 osa-u.5   4340103   pectate lyase 
 tae-r.2   123151851   pectate lyase 
 tae-r.2   123127312   pectate lyase 
 tae-r.2   123167261   pectate lyase 
 zma-u.5   100284055   uncharacterized LOC100284055 
 zma-u.5   107275230   uncharacterized LOC107275230 
 zma-u.5   542245   male gametophyte-specific 2 
 ath-u.5   AT2G02720   Pectate lyase family protein 
 ath-u.5   AT3G01270   Pectate lyase family protein 
 ath-u.5   AT5G15110   Pectate lyase family protein 
 gma-u.5   100810615   pectate lyase 
 gma-u.5   100810857   pectate lyase 
 sly-u.5   101264694   probable pectate lyase P59 
 vvi-u.5   100254377   pectate lyase 
 vvi-u.5   100257069   pectate lyase 
 vvi-u.5   100262177   pectate lyase 
 bna-r.1   125594097   probable pectate lyase 19 
 bna-r.1   125580832   probable pectate lyase 7 
 cit-r.1   102621878   probable pectate lyase 19 
 cit-r.1   127898591   probable pectate lyase 19 
 nta-r.1   107823631   pectate lyase-like 
 nta-r.1   107767268   pectate lyase-like 
 nta-r.1   107771085   putative pectate lyase P59 

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Top 50 coexpressed genes to 4341389 (osa-m.8 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4341389 (osa-m.8 coexpression data)

CoexMap"4341389"


osaLOC4341389 | Entrez gene ID : 4341389      
Species osa tae zma ath gma sly vvi bna cit nta sbi sot mtr bra hvu ppo ghi cre bdi
Paralog 5 3 3 3 2 1 3 2 2 3 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG osa00040 [list] [network] Pentose and glucuronate interconversions (76 genes)
GO BP
GO CC
GO MF
GO:0030570 [list] [network] pectate lyase activity  (12 genes)  IEA  
Protein XP_025881795.1 [sequence] [blastp]
XP_066167474.1 [sequence] [blastp]
Subcellular
localization
wolf
vacu 5,  golg 2,  E.R. 1,  mito 1,  extr 1,  E.R._plas 1,  cyto_E.R. 1  (predict for XP_025881795.1)
vacu 5,  golg 2,  E.R. 1,  mito 1,  extr 1,  E.R._plas 1,  cyto_E.R. 1  (predict for XP_066167474.1)
Subcellular
localization
TargetP
scret 9  (predict for XP_025881795.1)
scret 9  (predict for XP_066167474.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-m.8
for
4341389
osa-e.1
for
4341389
osa-u.5
for
4340105
osa-u.5
for
4340099
osa-u.5
for
4340103
tae-r.2
for
123151851
tae-r.2
for
123127312
tae-r.2
for
123167261
zma-u.5
for
100284055
zma-u.5
for
107275230
zma-u.5
for
542245
ath-u.5
for
AT2G02720
ath-u.5
for
AT3G01270
ath-u.5
for
AT5G15110
gma-u.5
for
100810615
gma-u.5
for
100810857
sly-u.5
for
101264694
vvi-u.5
for
100254377
vvi-u.5
for
100257069
vvi-u.5
for
100262177
bna-r.1
for
125594097
bna-r.1
for
125580832
cit-r.1
for
102621878
cit-r.1
for
127898591
nta-r.1
for
107823631
nta-r.1
for
107767268
nta-r.1
for
107771085


Ortholog ID: 483
Species osa osa tae tae tae zma zma zma ath ath ath gma gma sly sly sly vvi vvi bna cit nta nta nta
Symbol LOC4340099 LOC4340103 LOC123127312 LOC123167261 LOC123160072 LOC100284055 LOC542245 LOC100284356 AT3G01270 AT5G15110 AT59 LOC100810857 LOC100798579 LOC101264694 LAT59 LOC101260096 LOC100257069 LOC100262177 LOC106416640 LOC102621878 LOC107823631 LOC107761724 LOC107788586
Function* pectate lyase pectate lyase pectate lyase pectate lyase pectate lyase uncharacterized LOC100284055 male gametophyte-specific 2 pectate lyase Pectate lyase family protein Pectate lyase family protein Pectate lyase family protein pectate lyase pectate lyase probable pectate lyase P59 pectate lyase P59 probable pectate lyase P59 pectate lyase pectate lyase probable pectate lyase 6 probable pectate lyase 19 pectate lyase-like putative pectate lyase P59 pectate lyase-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00040 Pentose and glucuronate interconversions 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00040 Pentose and glucuronate interconversions 6
osa04075 Plant hormone signal transduction 2
osa04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 4
tae00040 Pentose and glucuronate interconversions 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00040 Pentose and glucuronate interconversions 3
tae00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00040 Pentose and glucuronate interconversions 4
tae00940 Phenylpropanoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00040 Pentose and glucuronate interconversions 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00040 Pentose and glucuronate interconversions 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00040 Pentose and glucuronate interconversions 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00040 Pentose and glucuronate interconversions 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00040 Pentose and glucuronate interconversions 5
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00040 Pentose and glucuronate interconversions 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00040 Pentose and glucuronate interconversions 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00040 Pentose and glucuronate interconversions 5
sly00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00040 Pentose and glucuronate interconversions 5
sly00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00040 Pentose and glucuronate interconversions 4
sly00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00040 Pentose and glucuronate interconversions 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00040 Pentose and glucuronate interconversions 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00040 Pentose and glucuronate interconversions 4
cit00460 Cyanoamino acid metabolism 3
cit00500 Starch and sucrose metabolism 3
cit00999 Biosynthesis of various plant secondary metabolites 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00040 Pentose and glucuronate interconversions 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00040 Pentose and glucuronate interconversions 12
nta00053 Ascorbate and aldarate metabolism 2
nta00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00040 Pentose and glucuronate interconversions 13
nta00053 Ascorbate and aldarate metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4340099 4340103 123127312 123167261 123160072 100284055 542245 100284356 821142 831363 838004 100810857 100798579 101264694 101253459 101260096 100257069 100262177 106416640 102621878 107823631 107761724 107788586
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