ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
osa-u.5	4341451	uncharacterized LOC4341451
osa-r.6	4341451	uncharacterized LOC4341451
osa-m.8	4341451	uncharacterized LOC4341451
osa-e.1	4341451	uncharacterized LOC4341451
osa-u.5	9266462	DUF724 domain-containing protein 3
tae-r.2	123127260	uncharacterized LOC123127260
tae-r.2	123136902	uncharacterized LOC123136902
tae-r.2	123144348	uncharacterized LOC123144348
hvu-r.1	123402852	uncharacterized LOC123402852
bdi-r.1	100824607	uncharacterized LOC100824607
zma-u.5	100193920	uncharacterized LOC100193920
zma-u.5	103629786	Plant Tudor-like RNA-binding protein
sbi-r.1	110430992	uncharacterized LOC110430992
ath-u.5	AT2G25590	Plant Tudor-like protein
ath-u.5	AT4G32440	Plant Tudor-like RNA-binding protein
ath-u.5	AT5G20030	Plant Tudor-like RNA-binding protein
gma-u.5	100812171	uncharacterized LOC100812171
gma-u.5	100800837	uncharacterized LOC100800837
gma-u.5	100809539	uncharacterized LOC100809539
sly-u.5	101262920	uncharacterized LOC101262920
sly-u.5	101249876	uncharacterized LOC101249876
bra-r.6	103856412	uncharacterized LOC103856412
bra-r.6	103834559	uncharacterized LOC103834559
bra-r.6	103850924	uncharacterized LOC103850924
vvi-u.5	100267997	uncharacterized LOC100267997
vvi-u.5	100264564	uncharacterized LOC100264564
ppo-u.5	7459014	protein AGENET DOMAIN (AGD)-CONTAINING P1
ppo-u.5	7490968	DUF724 domain-containing protein 1
ppo-u.5	7495761	uncharacterized LOC7495761
mtr-u.5	11436071	uncharacterized LOC11436071
mtr-u.5	11441618	uncharacterized LOC11441618
ghi-r.1	107962632	uncharacterized LOC107962632
ghi-r.1	107897210	uncharacterized LOC107897210
ghi-r.1	107897213	uncharacterized LOC107897213
bna-r.1	106375362	uncharacterized LOC106375362
bna-r.1	106361140	uncharacterized LOC106361140
sot-r.1	102595390	uncharacterized LOC102595390
sot-r.1	102579948	uncharacterized LOC102579948
cit-r.1	102609023	uncharacterized LOC102609023
nta-r.1	107829919	uncharacterized LOC107829919
nta-r.1	107822850	uncharacterized LOC107822850
nta-r.1	107805088	uncharacterized LOC107805088

Top 50 coexpressed genes to 4341451 (osa-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 4341451 (osa-u.5 coexpression data)

CoexMap"4341451"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_015640960.1 [sequence] [blastp]
XP_015640961.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, cyto 1, mito 1	(predict for XP_015640960.1)
cyto 4, nucl 2, cyto_plas 2, E.R. 1, golg 1, nucl_plas 1	(predict for XP_015640961.1)

Subcellular
localization
TargetP

other 6, scret 4	(predict for XP_015640960.1)
other 6, scret 4	(predict for XP_015640961.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	osa-u.5 for 4341451	osa-r.6 for 4341451	osa-m.8 for 4341451	osa-e.1 for 4341451	osa-u.5 for 9266462	tae-r.2 for 123127260	tae-r.2 for 123136902	tae-r.2 for 123144348	hvu-r.1 for 123402852	bdi-r.1 for 100824607	zma-u.5 for 100193920	zma-u.5 for 103629786	sbi-r.1 for 110430992	ath-u.5 for AT2G25590	ath-u.5 for AT4G32440	ath-u.5 for AT5G20030	gma-u.5 for 100812171	gma-u.5 for 100800837	gma-u.5 for 100809539	sly-u.5 for 101262920	sly-u.5 for 101249876	bra-r.6 for 103856412	bra-r.6 for 103834559	bra-r.6 for 103850924	vvi-u.5 for 100267997	vvi-u.5 for 100264564	ppo-u.5 for 7459014	ppo-u.5 for 7490968	ppo-u.5 for 7495761	mtr-u.5 for 11436071	mtr-u.5 for 11441618	ghi-r.1 for 107962632	ghi-r.1 for 107897210	ghi-r.1 for 107897213	bna-r.1 for 106375362	bna-r.1 for 106361140	sot-r.1 for 102595390	sot-r.1 for 102579948	cit-r.1 for 102609023	nta-r.1 for 107829919	nta-r.1 for 107822850	nta-r.1 for 107805088

Ortholog

Ortholog ID: 2534

Species

osa

tae

hvu

bdi

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

uncharacterized LOC4341451

DUF724 domain-containing protein 3

uncharacterized LOC123127260

uncharacterized LOC123136902

uncharacterized LOC123144348

uncharacterized LOC123402852

uncharacterized LOC100824607

uncharacterized LOC100193920

Plant Tudor-like RNA-binding protein

uncharacterized LOC110430992

Plant Tudor-like protein

Plant Tudor-like RNA-binding protein

uncharacterized LOC100800837

uncharacterized LOC100809539

uncharacterized LOC100795963

uncharacterized LOC101262920

uncharacterized LOC101249876

uncharacterized LOC103856412

uncharacterized LOC103850924

uncharacterized LOC103851318

uncharacterized LOC100267997

uncharacterized LOC100264564

protein AGENET DOMAIN (AGD)-CONTAINING P1

DUF724 domain-containing protein 1

uncharacterized LOC7495761

uncharacterized LOC11436071

uncharacterized LOC11441618

uncharacterized LOC107962632

uncharacterized LOC107914263

DUF724 domain-containing protein 7

uncharacterized LOC106361140

uncharacterized LOC106386724

uncharacterized LOC102595390

uncharacterized LOC102579948

uncharacterized LOC102609023

uncharacterized LOC107822850

uncharacterized LOC107778877

uncharacterized LOC142161704

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04146	Peroxisome	2
tae03015	mRNA surveillance pathway	2
tae04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04146	Peroxisome	2
tae03015	mRNA surveillance pathway	2
tae04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	4
ath03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00280	Valine, leucine and isoleucine degradation	2
gma00650	Butanoate metabolism	2
gma04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00280	Valine, leucine and isoleucine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04136	Autophagy - other	2
vvi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04075	Plant hormone signal transduction	4
mtr04626	Plant-pathogen interaction	4
mtr04016	MAPK signaling pathway - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04136	Autophagy - other	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00770	Pantothenate and CoA biosynthesis	3
nta01240	Biosynthesis of cofactors	3

Expression

Expression pattern

Entrez Gene ID^*

4341451

9266462

123127260

123136902

123144348

123402852

100824607

100193920

103629786

110430992

817098

829379

832125

100800837

100809539

100795963

101262920

101249876

103856412

103850924

103851318

100267997

100264564

7459014

7490968

7495761

11436071

11441618

107962632

107914263

121202948

106361140

106386724

102595390

102579948

102609023

107822850

107778877

142161704

The preparation time of this page was 0.1 [sec].


Species	osa	tae	hvu	bdi	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	5	3	1	1	2	1	3	3	2	3	2	3	2	3	2	2	1	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 4341451 (osa-u.5 coexpression data)

Top 50 enrichment test to 4341451 (osa-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**