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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5   4344189   pre-rRNA-processing protein ESF2 
 osa-r.6   4344189   pre-rRNA-processing protein ESF2 
 osa-m.8   4344189   pre-rRNA-processing protein ESF2 
 osa-e.1   4344189   pre-rRNA-processing protein ESF2 
 tae-r.2   123048815   pre-rRNA-processing protein ESF2 
 tae-r.2   123066924   pre-rRNA-processing protein ESF2 
 hvu-r.1   123424845   pre-rRNA-processing protein ESF2-like 
 bdi-r.1   100846888   pre-rRNA-processing protein ESF2 
 zma-u.5   100192645   activator of basal transcription 1 
 sbi-r.1   8073146   pre-rRNA-processing protein ESF2 
 ath-u.5   AT3G56510   RNA-binding (RRM/RBD/RNP motifs) family protein 
 gma-u.5   100798524   pre-rRNA-processing protein ESF2 
 gma-u.5   100782763   pre-rRNA-processing protein ESF2-like 
 sly-u.5   101268320   pre-rRNA-processing protein ESF2 
 sly-u.5   101251521   pre-rRNA-processing protein ESF2 
 bra-r.6   103841555   pre-rRNA-processing protein ESF2 
 vvi-u.5   100259435   pre-rRNA-processing protein ESF2 
 mtr-u.5   11416006   pre-rRNA-processing protein esf2 
 ghi-r.1   107926517   pre-rRNA-processing protein ESF2 
 ghi-r.1   107926354   pre-rRNA-processing protein ESF2 
 bna-r.1   106367985   pre-rRNA-processing protein ESF2 
 bna-r.1   106368079   pre-rRNA-processing protein ESF2 
 sot-r.1   102579612   pre-rRNA-processing protein esf2-like 
 sot-r.1   102589194   pre-rRNA-processing protein ESF2-like 
 sot-r.1   102591887   pre-rRNA-processing protein ESF2 
 cit-r.1   127900427   pre-rRNA-processing protein ESF2-like 
 cit-r.1   102607508   pre-rRNA-processing protein esf2 
 nta-r.1   107794512   pre-rRNA-processing protein ESF2-like 
 nta-r.1   107779934   pre-rRNA-processing protein esf2 
 nta-r.1   107761366   pre-rRNA-processing protein ESF2 
 cre-r.1   CHLRE_06g264500v5   uncharacterized protein 

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Top 50 coexpressed genes to 4344189 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4344189 (osa-u.5 coexpression data)

CoexMap"4344189"


osaLOC4344189 | Entrez gene ID : 4344189      
Species osa tae hvu bdi zma sbi ath gma sly bra vvi mtr ghi bna sot cit nta cre ppo
Paralog 4 2 1 1 1 1 1 2 2 1 1 1 2 2 3 2 3 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0034462 [list] [network] small-subunit processome assembly  (1 genes)  IEA  
GO:0000472 [list] [network] endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)  (3 genes)  IEA  
GO:0000480 [list] [network] endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)  (3 genes)  IEA  
GO:0000447 [list] [network] endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)  (6 genes)  IEA  
GO CC
GO:0005730 [list] [network] nucleolus  (202 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1223 genes)  IEA  
Protein NP_001390161.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  cyto 1  (predict for NP_001390161.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001390161.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.5
for
4344189
osa-r.6
for
4344189
osa-m.8
for
4344189
osa-e.1
for
4344189
tae-r.2
for
123048815
tae-r.2
for
123066924
hvu-r.1
for
123424845
bdi-r.1
for
100846888
zma-u.5
for
100192645
sbi-r.1
for
8073146
ath-u.5
for
AT3G56510
gma-u.5
for
100798524
gma-u.5
for
100782763
sly-u.5
for
101268320
sly-u.5
for
101251521
bra-r.6
for
103841555
vvi-u.5
for
100259435
mtr-u.5
for
11416006
ghi-r.1
for
107926517
ghi-r.1
for
107926354
bna-r.1
for
106367985
bna-r.1
for
106368079
sot-r.1
for
102579612
sot-r.1
for
102589194
sot-r.1
for
102591887
cit-r.1
for
127900427
cit-r.1
for
102607508
nta-r.1
for
107794512
nta-r.1
for
107779934
nta-r.1
for
107761366
cre-r.1
for
CHLRE_06g264500v5


Ortholog ID: 6291
Species osa tae tae tae hvu bdi zma sbi ath gma gma sly sly bra vvi mtr ghi ghi bna bna sot sot sot cit cit nta nta nta cre
Symbol LOC4344189 LOC123048815 LOC123066924 LOC123182959 LOC123424845 LOC100846888 LOC100192645 LOC8073146 AT3G56510 LOC100798524 LOC100782763 LOC101268320 LOC101251521 LOC103841555 LOC100259435 LOC11416006 LOC107926517 LOC107926354 LOC106367985 LOC106368079 LOC102579612 LOC102589194 LOC102591887 LOC127900427 LOC102607508 LOC107794512 LOC107779934 LOC107771807 CHLRE_06g264500v5
Function* pre-rRNA-processing protein ESF2 pre-rRNA-processing protein ESF2 pre-rRNA-processing protein ESF2 pre-rRNA-processing protein esf2 pre-rRNA-processing protein ESF2-like pre-rRNA-processing protein ESF2 activator of basal transcription 1 pre-rRNA-processing protein ESF2 RNA-binding (RRM/RBD/RNP motifs) family protein pre-rRNA-processing protein ESF2 pre-rRNA-processing protein ESF2-like pre-rRNA-processing protein ESF2 pre-rRNA-processing protein ESF2 pre-rRNA-processing protein ESF2 pre-rRNA-processing protein ESF2 pre-rRNA-processing protein esf2 pre-rRNA-processing protein ESF2 pre-rRNA-processing protein ESF2 pre-rRNA-processing protein ESF2 pre-rRNA-processing protein ESF2 pre-rRNA-processing protein esf2-like pre-rRNA-processing protein ESF2-like pre-rRNA-processing protein ESF2 pre-rRNA-processing protein ESF2-like pre-rRNA-processing protein esf2 pre-rRNA-processing protein ESF2-like pre-rRNA-processing protein esf2 pre-rRNA-processing protein esf2 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01210 2-Oxocarboxylic acid metabolism 2
hvu01230 Biosynthesis of amino acids 2
hvu00970 Aminoacyl-tRNA biosynthesis 2
hvu00230 Purine metabolism 2
hvu01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 2
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 5
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 3
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 2
gma04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 2
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03022 Basal transcription factors 2
cit03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4344189 123048815 123066924 123182959 123424845 100846888 100192645 8073146 824818 100798524 100782763 101268320 101251521 103841555 100259435 11416006 107926517 107926354 106367985 106368079 102579612 102589194 102591887 127900427 102607508 107794512 107779934 107771807 5721974
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