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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-m.8   4344725   choline-phosphate cytidylyltransferase 2 
 osa-e.1   4344725   choline-phosphate cytidylyltransferase 2 
 osa-u.5   4349510   choline-phosphate cytidylyltransferase 2 
 osa-u.5   4328455   choline-phosphate cytidylyltransferase 1 
 zma-u.5   100283945   choline-phosphate cytidylyltransferase B 
 zma-u.5   100273724   uncharacterized LOC100273724 
 ath-u.5   CCT1   phosphorylcholine cytidylyltransferase 
 ath-u.5   CCT2   phosphorylcholine cytidylyltransferase2 
 gma-u.5   100786249   choline-phosphate cytidylyltransferase 1 
 gma-u.5   100791886   choline-phosphate cytidylyltransferase B-like 
 sly-u.5   101264888   choline-phosphate cytidylyltransferase 1 
 vvi-u.5   100245839   choline-phosphate cytidylyltransferase 1 
 vvi-u.5   100267395   choline-phosphate cytidylyltransferase 2 
 ppo-u.5   7455848   choline-phosphate cytidylyltransferase 2 
 ppo-u.5   18094638   choline-phosphate cytidylyltransferase 1 
 ppo-u.5   7461969   choline-phosphate cytidylyltransferase 1 
 mtr-u.5   11438697   choline-phosphate cytidylyltransferase 1 
 mtr-u.5   25489647   choline-phosphate cytidylyltransferase 2 

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Top 50 coexpressed genes to 4344725 (osa-m.8 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4344725 (osa-m.8 coexpression data)

CoexMap"4344725"


osaLOC4344725 | Entrez gene ID : 4344725      
Species osa zma ath gma sly vvi ppo mtr sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 2 2 2 1 2 3 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG osa00440 [list] [network] Phosphonate and phosphinate metabolism (9 genes)
osa00564 [list] [network] Glycerophospholipid metabolism (122 genes)
GO BP
GO:0006657 [list] [network] CDP-choline pathway  (3 genes)  IEA  
GO CC
GO MF
GO:0004105 [list] [network] choline-phosphate cytidylyltransferase activity  (3 genes)  IEA  
GO:0031210 [list] [network] phosphatidylcholine binding  (3 genes)  IEA  
Protein XP_015649450.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  pero 2,  cysk 2,  cyto_E.R. 2,  cyto_plas 2  (predict for XP_015649450.1)
Subcellular
localization
TargetP
other 8  (predict for XP_015649450.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-m.8
for
4344725

.
osa-e.1
for
4344725

.
osa-u.5
for
4349510

.
osa-u.5
for
4328455

.
zma-u.5
for
100283945

.
zma-u.5
for
100273724

.
ath-u.5
for
CCT1

.
ath-u.5
for
CCT2

.
gma-u.5
for
100786249

.
gma-u.5
for
100791886

.
sly-u.5
for
101264888

.
vvi-u.5
for
100245839

.
vvi-u.5
for
100267395

.
ppo-u.5
for
7455848

.
ppo-u.5
for
18094638

.
ppo-u.5
for
7461969

.
mtr-u.5
for
11438697

.
mtr-u.5
for
25489647

.


Ortholog ID: 2394
Species ath ath gma gma sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna sbi sot sot cit cit bdi bdi nta nta
Symbol CCT2 CCT1 LOC100786249 LOC100791886 LOC101264888 LOC4328455 LOC4349510 LOC100283945 LOC100273724 LOC103857417 LOC103843610 LOC100245839 LOC100267395 LOC18094638 LOC7461969 LOC11438697 LOC25489647 LOC123050771 LOC123136627 LOC123436836 LOC123401470 LOC107954865 LOC107955684 LOC106387975 LOC8055124 LOC102585509 LOC102605049 LOC102627169 LOC102628293 LOC100842053 LOC100825926 LOC107768888 LOC107779719
Function* phosphorylcholine cytidylyltransferase2 phosphorylcholine cytidylyltransferase choline-phosphate cytidylyltransferase 1 choline-phosphate cytidylyltransferase B-like choline-phosphate cytidylyltransferase 1 choline-phosphate cytidylyltransferase 1 choline-phosphate cytidylyltransferase 2 choline-phosphate cytidylyltransferase B uncharacterized LOC100273724 choline-phosphate cytidylyltransferase 1 choline-phosphate cytidylyltransferase 1 choline-phosphate cytidylyltransferase 1 choline-phosphate cytidylyltransferase 2 choline-phosphate cytidylyltransferase 1 choline-phosphate cytidylyltransferase 1 choline-phosphate cytidylyltransferase 1 choline-phosphate cytidylyltransferase 2 choline-phosphate cytidylyltransferase 2 choline-phosphate cytidylyltransferase 2 choline-phosphate cytidylyltransferase 2-like choline-phosphate cytidylyltransferase 2-like choline-phosphate cytidylyltransferase 1 choline-phosphate cytidylyltransferase 1 choline-phosphate cytidylyltransferase 1 choline-phosphate cytidylyltransferase 2 choline-phosphate cytidylyltransferase 1-like choline-phosphate cytidylyltransferase 1-like choline-phosphate cytidylyltransferase 1 choline-phosphate cytidylyltransferase 2-like choline-phosphate cytidylyltransferase 2 choline-phosphate cytidylyltransferase 1 choline-phosphate cytidylyltransferase 2 choline-phosphate cytidylyltransferase 2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00440 Phosphonate and phosphinate metabolism 2
gma00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00440 Phosphonate and phosphinate metabolism 2
gma00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04130 SNARE interactions in vesicular transport 3
osa04144 Endocytosis 2
osa03040 Spliceosome 2
osa04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00062 Fatty acid elongation 3
osa04626 Plant-pathogen interaction 3
osa01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04016 MAPK signaling pathway - plant 3
zma04075 Plant hormone signal transduction 3
zma00240 Pyrimidine metabolism 2
zma01232 Nucleotide metabolism 2
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 6
zma03420 Nucleotide excision repair 3
zma03430 Mismatch repair 3
zma03440 Homologous recombination 2
zma03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04130 SNARE interactions in vesicular transport 2
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 3
bra00480 Glutathione metabolism 2
bra00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 7
tae01230 Biosynthesis of amino acids 7
tae00010 Glycolysis / Gluconeogenesis 6
tae00051 Fructose and mannose metabolism 5
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 7
tae04016 MAPK signaling pathway - plant 4
tae00440 Phosphonate and phosphinate metabolism 3
tae00564 Glycerophospholipid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 3
hvu00071 Fatty acid degradation 2
hvu00592 alpha-Linolenic acid metabolism 2
hvu01212 Fatty acid metabolism 2
hvu01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00061 Fatty acid biosynthesis 2
hvu01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 6
ghi04075 Plant hormone signal transduction 6
ghi04070 Phosphatidylinositol signaling system 4
ghi04626 Plant-pathogen interaction 4
ghi04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 6
ghi04075 Plant hormone signal transduction 6
ghi04070 Phosphatidylinositol signaling system 4
ghi04626 Plant-pathogen interaction 4
ghi04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00440 Phosphonate and phosphinate metabolism 4
bna00564 Glycerophospholipid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 5
sot00440 Phosphonate and phosphinate metabolism 2
sot00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 5
sot00440 Phosphonate and phosphinate metabolism 2
sot00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 4
cit00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 3
bdi03060 Protein export 3
bdi00520 Amino sugar and nucleotide sugar metabolism 2
bdi01250 Biosynthesis of nucleotide sugars 2
bdi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 2
bdi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00440 Phosphonate and phosphinate metabolism 2
nta00564 Glycerophospholipid metabolism 2
nta04144 Endocytosis 2
nta00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 8
nta03272 Virion - Hepatitis viruses 4
nta00440 Phosphonate and phosphinate metabolism 2
nta00564 Glycerophospholipid metabolism 2
nta03250 Viral life cycle - HIV-1 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827179 817786 100786249 100791886 101264888 4328455 4349510 100283945 100273724 103857417 103843610 100245839 100267395 18094638 7461969 11438697 25489647 123050771 123136627 123436836 123401470 107954865 107955684 106387975 8055124 102585509 102605049 102627169 102628293 100842053 100825926 107768888 107779719
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