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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5   4345622   F-box protein SKIP28 
 osa-r.6   4345622   F-box protein SKIP28 
 osa-e.1   4345622   F-box protein SKIP28 
 tae-r.2   123046559   F-box protein SKIP28 
 tae-r.2   123054416   F-box protein SKIP28 
 tae-r.2   123054417   F-box protein SKIP28 
 hvu-r.1   123427730   F-box protein SKIP28-like 
 bdi-r.1   100822257   F-box protein SKIP28 
 zma-u.5   100273105   uncharacterized LOC100273105 
 sbi-r.1   8075640   F-box protein SKIP28 
 ath-u.5   MEE11   RNI-like superfamily protein 
 gma-u.5   100806504   F-box protein SKIP28-like 
 sly-u.5   101254415   F-box protein SKIP28 
 bra-r.6   103854052   F-box protein SKIP28 
 vvi-u.5   100268116   F-box protein SKIP28 
 ppo-u.5   7462685   F-box protein SKIP28 
 mtr-u.5   11412387   F-box protein SKIP28 
 ghi-r.1   107922203   F-box protein SKIP28 
 ghi-r.1   107893723   F-box protein SKIP28 
 bna-r.1   106432939   F-box protein SKIP28-like 
 bna-r.1   106401270   F-box protein SKIP28 
 sot-r.1   102586841   F-box protein SKIP28 
 cit-r.1   102622506   F-box protein SKIP28 
 nta-r.1   107811541   F-box protein SKIP28 
 nta-r.1   107766467   F-box protein SKIP28-like 

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Top 50 coexpressed genes to 4345622 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4345622 (osa-u.5 coexpression data)

CoexMap"4345622"


osaLOC4345622 | Entrez gene ID : 4345622    
Species osa tae hvu bdi zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 3 1 1 1 1 1 1 1 1 1 1 1 2 2 1 1 2 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005737 [list] [network] cytoplasm  (5212 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (4590 genes)  IEA  
Protein XP_015648449.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  nucl 1  (predict for XP_015648449.1)
Subcellular
localization
TargetP
other 6,  chlo 4  (predict for XP_015648449.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.5
for
4345622
osa-r.6
for
4345622
osa-e.1
for
4345622
tae-r.2
for
123046559
tae-r.2
for
123054416
tae-r.2
for
123054417
hvu-r.1
for
123427730
bdi-r.1
for
100822257
zma-u.5
for
100273105
sbi-r.1
for
8075640
ath-u.5
for
MEE11
gma-u.5
for
100806504
sly-u.5
for
101254415
bra-r.6
for
103854052
vvi-u.5
for
100268116
ppo-u.5
for
7462685
mtr-u.5
for
11412387
ghi-r.1
for
107922203
ghi-r.1
for
107893723
bna-r.1
for
106432939
bna-r.1
for
106401270
sot-r.1
for
102586841
cit-r.1
for
102622506
nta-r.1
for
107811541
nta-r.1
for
107766467


Ortholog ID: 7910
Species osa tae tae tae hvu bdi zma sbi ath gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta
Symbol LOC4345622 LOC123054416 LOC123054417 LOC123190295 LOC123427730 LOC100822257 LOC100273105 LOC8075640 MEE11 LOC100806504 LOC101254415 LOC103854052 LOC100268116 LOC7462685 LOC11412387 LOC107922203 LOC107893723 LOC106432939 LOC125590590 LOC102586841 LOC102622506 LOC107811541 LOC107766467
Function* F-box protein SKIP28 F-box protein SKIP28 F-box protein SKIP28 F-box protein SKIP28 F-box protein SKIP28-like F-box protein SKIP28 uncharacterized LOC100273105 F-box protein SKIP28 RNI-like superfamily protein F-box protein SKIP28-like F-box protein SKIP28 F-box protein SKIP28 F-box protein SKIP28 F-box protein SKIP28 F-box protein SKIP28 F-box protein SKIP28 F-box protein SKIP28 F-box protein SKIP28-like F-box protein SKIP28-like F-box protein SKIP28 F-box protein SKIP28 F-box protein SKIP28 F-box protein SKIP28-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00280 Valine, leucine and isoleucine degradation 5
osa00310 Lysine degradation 3
osa00071 Fatty acid degradation 3
osa03082 ATP-dependent chromatin remodeling 2
osa03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00630 Glyoxylate and dicarboxylate metabolism 4
tae00710 Carbon fixation by Calvin cycle 4
tae01200 Carbon metabolism 4
tae00020 Citrate cycle (TCA cycle) 3
tae00270 Cysteine and methionine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00010 Glycolysis / Gluconeogenesis 3
hvu00710 Carbon fixation by Calvin cycle 3
hvu01200 Carbon metabolism 3
hvu01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00561 Glycerolipid metabolism 2
sbi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 2
gma00500 Starch and sucrose metabolism 2
gma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04146 Peroxisome 2
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00630 Glyoxylate and dicarboxylate metabolism 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00908 Zeatin biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04146 Peroxisome 5
bna00860 Porphyrin metabolism 2
bna01240 Biosynthesis of cofactors 2
bna00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 5
sot00630 Glyoxylate and dicarboxylate metabolism 3
sot00710 Carbon fixation by Calvin cycle 3
sot01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
nta00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 3
nta00480 Glutathione metabolism 2
nta00740 Riboflavin metabolism 2
nta01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4345622 123054416 123054417 123190295 123427730 100822257 100273105 8075640 814691 100806504 101254415 103854052 100268116 7462685 11412387 107922203 107893723 106432939 125590590 102586841 102622506 107811541 107766467
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