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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5   4345984   transcription factor bHLH130 
 osa-r.6   4345984   transcription factor bHLH130 
 osa-m.8   4345984   transcription factor bHLH130 
 osa-e.1   4345984   transcription factor bHLH130 
 osa-u.5   4347431   transcription factor bHLH130 
 zma-u.5   103647540   transcription factor bHLH130 
 zma-u.5   103647749   transcription factor bHLH130 
 zma-u.5   103653785   transcription factor bHLH130 
 ath-u.5   FBH4   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-u.5   FBH3   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 gma-u.5   100789855   transcription factor bHLH122 
 gma-u.5   100796534   transcription factor bHLH130 
 gma-u.5   100803833   transcription factor bHLH122 
 sly-u.5   BHLH95   transcription factor bHLH95 
 vvi-u.5   100267478   transcription factor bHLH130 
 vvi-u.5   100253656   transcription factor bHLH130 
 ppo-u.5   7478336   transcription factor bHLH122 
 ppo-u.5   7483995   transcription factor bHLH130 
 ppo-u.5   18094307   transcription factor bHLH130 
 mtr-u.5   11430799   transcription factor bHLH130 
 mtr-u.5   11421472   transcription factor bHLH130 
 mtr-u.5   25483400   transcription factor bHLH130 

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Top 50 coexpressed genes to 4345984 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4345984 (osa-u.5 coexpression data)

CoexMap"4345984"


osaLOC4345984 | Entrez gene ID : 4345984      
Species osa zma ath gma sly vvi ppo mtr bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 5 3 2 3 1 2 3 3 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (380 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (3003 genes)  IEA  
GO MF
GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding  (221 genes)  IEA  
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific  (257 genes)  IEA  
GO:0046983 [list] [network] protein dimerization activity  (464 genes)  IEA  
Protein XP_015650699.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  chlo 2  (predict for XP_015650699.1)
Subcellular
localization
TargetP
other 4  (predict for XP_015650699.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.5
for
4345984
osa-r.6
for
4345984
osa-m.8
for
4345984
osa-e.1
for
4345984
osa-u.5
for
4347431
zma-u.5
for
103647540
zma-u.5
for
103647749
zma-u.5
for
103653785
ath-u.5
for
FBH4
ath-u.5
for
FBH3
gma-u.5
for
100789855
gma-u.5
for
100796534
gma-u.5
for
100803833
sly-u.5
for
BHLH95
vvi-u.5
for
100267478
vvi-u.5
for
100253656
ppo-u.5
for
7478336
ppo-u.5
for
7483995
ppo-u.5
for
18094307
mtr-u.5
for
11430799
mtr-u.5
for
11421472
mtr-u.5
for
25483400


Ortholog ID: 2269
Species osa osa tae tae hvu hvu bdi bdi zma zma sbi sbi ath ath gma gma sly bra bra vvi vvi ppo ppo mtr mtr ghi ghi bna bna sot cit cit nta nta
Symbol LOC4347431 LOC4345984 LOC123121922 LOC123151185 LOC123409419 LOC123399378 LOC100823417 LOC100846325 LOC103647749 LOC103647540 LOC8064032 LOC110433186 FBH3 FBH4 LOC100814652 LOC100789855 BHLH95 LOC103871298 LOC103865936 LOC100267478 LOC100253656 LOC7478336 LOC7483995 LOC11421472 LOC25492600 LOC121229572 LOC107959320 LOC106435350 LOC106431535 LOC102582309 LOC102607398 LOC102625251 LOC107783687 LOC107822230
Function* transcription factor bHLH130 transcription factor bHLH130 transcription factor bHLH130 transcription factor bHLH130 transcription factor bHLH130-like transcription factor bHLH130-like transcription factor bHLH130 transcription factor bHLH130 transcription factor bHLH130 transcription factor bHLH130 transcription factor bHLH130 transcription factor bHLH130-like basic helix-loop-helix (bHLH) DNA-binding superfamily protein basic helix-loop-helix (bHLH) DNA-binding superfamily protein transcription factor bHLH130 transcription factor bHLH122 transcription factor bHLH95 transcription factor bHLH122 transcription factor bHLH130 transcription factor bHLH130 transcription factor bHLH130 transcription factor bHLH122 transcription factor bHLH130 transcription factor bHLH130 transcription factor bHLH122 transcription factor bHLH130 transcription factor bHLH122 transcription factor bHLH122 transcription factor bHLH130 transcription factor bHLH130-like transcription factor bHLH130-like transcription factor bHLH122 transcription factor bHLH130-like transcription factor bHLH130-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04016 MAPK signaling pathway - plant 2
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 5
tae04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04626 Plant-pathogen interaction 3
bdi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00052 Galactose metabolism 2
sbi00062 Fatty acid elongation 2
sbi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 7
ath04016 MAPK signaling pathway - plant 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 3
ath01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 7
gma04075 Plant hormone signal transduction 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00310 Lysine degradation 2
gma03083 Polycomb repressive complex 2
gma00220 Arginine biosynthesis 2
gma00250 Alanine, aspartate and glutamate metabolism 2
gma00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 4
bra04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
bra04016 MAPK signaling pathway - plant 2
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00052 Galactose metabolism 2
mtr00520 Amino sugar and nucleotide sugar metabolism 2
mtr01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 6
bna04075 Plant hormone signal transduction 4
bna04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00280 Valine, leucine and isoleucine degradation 5
nta00250 Alanine, aspartate and glutamate metabolism 3
nta00270 Cysteine and methionine metabolism 3
nta01200 Carbon metabolism 3
nta01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04081 Hormone signaling 2
nta00561 Glycerolipid metabolism 2
nta00564 Glycerophospholipid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4347431 4345984 123121922 123151185 123409419 123399378 100823417 100846325 103647749 103647540 8064032 110433186 841537 818829 100814652 100789855 101258607 103871298 103865936 100267478 100253656 7478336 7483995 11421472 25492600 121229572 107959320 106435350 106431535 102582309 102607398 102625251 107783687 107822230
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