ATTED-II : GeneCoexpression result

Species	Gene	Description
osa-u.5	4347428	probable polygalacturonase
osa-r.6	4347428	probable polygalacturonase
osa-e.1	4347428	probable polygalacturonase
zma-u.5	100282589	polygalacturonase
ath-u.5	AT3G57790	Pectin lyase-like superfamily protein
gma-u.5	100794954	exo-poly-alpha-D-galacturonosidase
sly-u.5	101260208	uncharacterized LOC101260208
vvi-u.5	100257213	uncharacterized LOC100257213
ppo-u.5	7468957	uncharacterized LOC7468957
mtr-u.5	11418485	exo-poly-alpha-D-galacturonosidase

functional annotation

KEGG

GO BP

GO:0005975 [list] [network] carbohydrate metabolic process

(757 genes)

IEA

GO CC

GO MF

GO:0004650 [list] [network] polygalacturonase activity

(43 genes)

IEA

Protein

XP_015651424.1 [sequence] [blastp]

Subcellular
localization
wolf

vacu 4, chlo 3, E.R. 1, chlo_mito 1

(predict for XP_015651424.1)

Subcellular
localization
TargetP

scret 9

(predict for XP_015651424.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	osa-u.5 for 4347428	osa-r.6 for 4347428	osa-e.1 for 4347428	zma-u.5 for 100282589	ath-u.5 for AT3G57790	gma-u.5 for 100794954	sly-u.5 for 101260208	vvi-u.5 for 100257213	ppo-u.5 for 7468957	mtr-u.5 for 11418485

Ortholog ID: 9544

Species

osa

tae

hvu

bdi

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

sot

cit

nta

cre

Symbol

Function^*

probable polygalacturonase

exopolygalacturonase

probable polygalacturonase

exopolygalacturonase-like

probable polygalacturonase

polygalacturonase

probable polygalacturonase

Pectin lyase-like superfamily protein

exo-poly-alpha-D-galacturonosidase

uncharacterized LOC101260208

probable polygalacturonase

uncharacterized LOC100257213

uncharacterized LOC7468957

exo-poly-alpha-D-galacturonosidase

uncharacterized LOC102609616

putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial

putative polygalacturonase At3g15720

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00052	Galactose metabolism	3
osa00511	Other glycan degradation	2
osa00040	Pentose and glucuronate interconversions	2
osa00600	Sphingolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00250	Alanine, aspartate and glutamate metabolism	3
tae00330	Arginine and proline metabolism	3
tae01200	Carbon metabolism	3
tae00020	Citrate cycle (TCA cycle)	2
tae00630	Glyoxylate and dicarboxylate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00520	Amino sugar and nucleotide sugar metabolism	3
bdi00280	Valine, leucine and isoleucine degradation	2
bdi01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00190	Oxidative phosphorylation	15
zma04145	Phagosome	15
zma04142	Lysosome	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00280	Valine, leucine and isoleucine degradation	4
sbi00330	Arginine and proline metabolism	3
sbi04146	Peroxisome	2
sbi00620	Pyruvate metabolism	2
sbi00071	Fatty acid degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00053	Ascorbate and aldarate metabolism	4
gma04120	Ubiquitin mediated proteolysis	2
gma00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00220	Arginine biosynthesis	2
sly01210	2-Oxocarboxylic acid metabolism	2
sly01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00040	Pentose and glucuronate interconversions	3
vvi00520	Amino sugar and nucleotide sugar metabolism	2
vvi01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00280	Valine, leucine and isoleucine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi01240	Biosynthesis of cofactors	6
ghi03010	Ribosome	4
ghi00053	Ascorbate and aldarate metabolism	3
ghi00785	Lipoic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi01240	Biosynthesis of cofactors	7
ghi03010	Ribosome	4
ghi00053	Ascorbate and aldarate metabolism	3
ghi00230	Purine metabolism	2
ghi00240	Pyrimidine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00520	Amino sugar and nucleotide sugar metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

4347428

123075099

123104158

123399373

123440600

100830144

100282589

8064845

824949

100794954

101260208

103848548

100257213

7468957

11418485

107891280

107889531

102599672

102609616

107759633

107791996

5719753

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 4347428 (osa-u.5 coexpression data)

Top 50 enrichment test to 4347428 (osa-u.5 coexpression data)


Species	osa	zma	ath	gma	sly	vvi	ppo	mtr	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	3	1	1	1	1	1	1	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 4347428 (osa-u.5 coexpression data)

Top 50 enrichment test to 4347428 (osa-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**