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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5   4351103   probable beta-D-xylosidase 2 
 osa-r.6   4351103   probable beta-D-xylosidase 2 
 osa-e.1   4351103   probable beta-D-xylosidase 2 
 tae-r.2   123086223   probable beta-D-xylosidase 2 
 tae-r.2   123091616   probable beta-D-xylosidase 2 
 tae-r.2   123096840   probable beta-D-xylosidase 2 
 bdi-r.1   100829091   probable beta-D-xylosidase 2 
 zma-u.5   100279508   uncharacterized LOC100279508 
 sbi-r.1   8070217   beta-D-xylosidase 1 
 ath-u.5   BXL1   beta-xylosidase 1 
 ath-u.5   BXL2   beta-xylosidase 2 
 gma-u.5   100778624   probable beta-D-xylosidase 2 
 gma-u.5   100798630   probable beta-D-xylosidase 2 
 gma-u.5   100805839   beta-D-xylosidase 1 
 sly-u.5   Arf/Xyl1   alpha-L-arabinofuranosidase/beta-xylosidase 
 sly-u.5   Arf/Xyl2   alpha-L-arabinofuranosidase/beta-xylosidase 
 bra-r.6   103837284   beta-D-xylosidase 1 
 bra-r.6   103844567   probable beta-D-xylosidase 2 
 bra-r.6   103854592   beta-D-xylosidase 1 
 vvi-u.5   100252178   probable beta-D-xylosidase 2 
 vvi-u.5   100249978   putative beta-D-xylosidase 
 ppo-u.5   7471119   putative beta-D-xylosidase 
 ppo-u.5   7491265   probable beta-D-xylosidase 2 
 ppo-u.5   7460449   probable beta-D-xylosidase 2 
 mtr-u.5   11412498   beta-D-xylosidase 1 
 mtr-u.5   11430018   probable beta-D-xylosidase 2 
 mtr-u.5   11407644   probable beta-D-xylosidase 2 
 ghi-r.1   107946033   probable beta-D-xylosidase 2 
 ghi-r.1   107926474   beta-D-xylosidase 1 
 ghi-r.1   107915099   beta-D-xylosidase 1 
 bna-r.1   106348810   beta-D-xylosidase 1 
 bna-r.1   111200855   beta-D-xylosidase 1 
 bna-r.1   106423090   probable beta-D-xylosidase 2 
 sot-r.1   102603514   probable beta-D-xylosidase 2 
 sot-r.1   102606442   beta-D-xylosidase 1 
 cit-r.1   102625511   probable beta-D-xylosidase 2 
 cit-r.1   102627794   beta-D-xylosidase 1 
 nta-r.1   107822960   beta-D-xylosidase 1 
 nta-r.1   107781973   putative beta-D-xylosidase 2 
 nta-r.1   107810773   putative beta-D-xylosidase 2 

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Top 50 coexpressed genes to 4351103 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4351103 (osa-u.5 coexpression data)

CoexMap""


osaLOC4351103 | Entrez gene ID : 4351103    
Species osa tae bdi zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre hvu
Paralog 3 3 1 1 1 2 3 2 3 2 3 3 3 3 2 2 3 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
Function probable beta-D-xylosidase 2
KEGG
GO BP
GO:0031222 [list] [network] arabinan catabolic process  (9 genes)  IEA  
GO:0045493 [list] [network] xylan catabolic process  (9 genes)  IEA  
GO CC
GO:0009505 [list] [network] plant-type cell wall  (102 genes)  IEA  
GO MF
GO:0009044 [list] [network] xylan 1,4-beta-xylosidase activity  (9 genes)  IEA  
GO:0046556 [list] [network] alpha-L-arabinofuranosidase activity  (18 genes)  IEA  
Protein XP_015617205.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 5,  chlo 4  (predict for XP_015617205.1)
Subcellular
localization
TargetP
mito 3,  scret 3  (predict for XP_015617205.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

osa-u.5
for
4351103


osa-r.6
for
4351103


osa-e.1
for
4351103


tae-r.2
for
123086223


tae-r.2
for
123091616


tae-r.2
for
123096840


bdi-r.1
for
100829091


zma-u.5
for
100279508


sbi-r.1
for
8070217


ath-u.5
for
BXL1


ath-u.5
for
BXL2


gma-u.5
for
100778624


gma-u.5
for
100798630


gma-u.5
for
100805839


sly-u.5
for
Arf/Xyl1


sly-u.5
for
Arf/Xyl2


bra-r.6
for
103837284


bra-r.6
for
103844567


bra-r.6
for
103854592


vvi-u.5
for
100252178


vvi-u.5
for
100249978


ppo-u.5
for
7471119


ppo-u.5
for
7491265


ppo-u.5
for
7460449


mtr-u.5
for
11412498


mtr-u.5
for
11430018


mtr-u.5
for
11407644


ghi-r.1
for
107946033


ghi-r.1
for
107926474


ghi-r.1
for
107915099


bna-r.1
for
106348810


bna-r.1
for
111200855


bna-r.1
for
106423090


sot-r.1
for
102603514


sot-r.1
for
102606442


cit-r.1
for
102625511


cit-r.1
for
102627794


nta-r.1
for
107822960


nta-r.1
for
107781973


nta-r.1
for
107810773

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Ortholog ID: 3153
Species osa tae tae tae bdi zma sbi ath ath gma gma gma sly sly bra bra bra vvi vvi ppo ppo ppo mtr mtr mtr ghi ghi ghi bna bna bna sot sot cit cit nta nta nta
Symbol LOC4351103 LOC123086223 LOC123091616 LOC123096840 LOC100829091 LOC100279508 LOC8070217 BXL1 BXL2 LOC100809501 LOC100812823 LOC100789316 Arf/Xyl1 Arf/Xyl2 LOC103837284 LOC103854592 LOC103874626 LOC100252178 LOC100249978 LOC7471119 LOC7460449 LOC7482262 LOC11412498 LOC11430018 LOC11407644 LOC107946033 LOC107915099 LOC107896612 LOC106348810 LOC106423090 LOC106401837 LOC102603514 LOC102606442 LOC102625511 LOC102627794 LOC107822960 LOC107781973 LOC107818832
Function* probable beta-D-xylosidase 2 probable beta-D-xylosidase 2 probable beta-D-xylosidase 2 probable beta-D-xylosidase 2 probable beta-D-xylosidase 2 uncharacterized LOC100279508 beta-D-xylosidase 1 beta-xylosidase 1 beta-xylosidase 2 probable beta-D-xylosidase 2 beta-D-xylosidase 1 probable beta-D-xylosidase 2 alpha-L-arabinofuranosidase/beta-xylosidase alpha-L-arabinofuranosidase/beta-xylosidase beta-D-xylosidase 1 beta-D-xylosidase 1 beta-D-xylosidase 1 probable beta-D-xylosidase 2 putative beta-D-xylosidase putative beta-D-xylosidase probable beta-D-xylosidase 2 putative beta-D-xylosidase beta-D-xylosidase 1 probable beta-D-xylosidase 2 probable beta-D-xylosidase 2 probable beta-D-xylosidase 2 beta-D-xylosidase 1 beta-D-xylosidase 1 beta-D-xylosidase 1 probable beta-D-xylosidase 2 probable beta-D-xylosidase 2 probable beta-D-xylosidase 2 beta-D-xylosidase 1 probable beta-D-xylosidase 2 beta-D-xylosidase 1 beta-D-xylosidase 1 putative beta-D-xylosidase 2 beta-D-xylosidase 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00940 Phenylpropanoid biosynthesis 6
tae00941 Flavonoid biosynthesis 3
tae00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 3
tae00260 Glycine, serine and threonine metabolism 3
tae00310 Lysine degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00260 Glycine, serine and threonine metabolism 3
tae00310 Lysine degradation 3
tae04146 Peroxisome 3
tae00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00940 Phenylpropanoid biosynthesis 4
tae00260 Glycine, serine and threonine metabolism 3
tae00310 Lysine degradation 3
tae04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00591 Linoleic acid metabolism 2
gma00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00908 Zeatin biosynthesis 3
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00908 Zeatin biosynthesis 2
bra00910 Nitrogen metabolism 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00250 Alanine, aspartate and glutamate metabolism 4
ppo01200 Carbon metabolism 3
ppo01230 Biosynthesis of amino acids 2
ppo01250 Biosynthesis of nucleotide sugars 2
ppo00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00280 Valine, leucine and isoleucine degradation 4
mtr00561 Glycerolipid metabolism 3
mtr00520 Amino sugar and nucleotide sugar metabolism 2
mtr01250 Biosynthesis of nucleotide sugars 2
mtr00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04145 Phagosome 6
mtr04517 IgSF CAM signaling 6
mtr04814 Motor proteins 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 2
ghi00760 Nicotinate and nicotinamide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 2
ghi00760 Nicotinate and nicotinamide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00020 Citrate cycle (TCA cycle) 2
bna00630 Glyoxylate and dicarboxylate metabolism 2
bna01200 Carbon metabolism 2
bna01210 2-Oxocarboxylic acid metabolism 2
bna01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00100 Steroid biosynthesis 4
nta00561 Glycerolipid metabolism 4
nta00564 Glycerophospholipid metabolism 4
nta00565 Ether lipid metabolism 4
nta00590 Arachidonic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00460 Cyanoamino acid metabolism 2
nta00500 Starch and sucrose metabolism 2
nta00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00280 Valine, leucine and isoleucine degradation 5
nta00250 Alanine, aspartate and glutamate metabolism 3
nta00270 Cysteine and methionine metabolism 3
nta01200 Carbon metabolism 3
nta01210 2-Oxocarboxylic acid metabolism 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4351103 123086223 123091616 123096840 100829091 100279508 8070217 834996 837940 100809501 100812823 100789316 101055558 101055559 103837284 103854592 103874626 100252178 100249978 7471119 7460449 7482262 11412498 11430018 11407644 107946033 107915099 107896612 106348810 106423090 106401837 102603514 102606442 102625511 102627794 107822960 107781973 107818832
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