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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5   4351878   uncharacterized LOC4351878 
 osa-r.6   4351878   uncharacterized LOC4351878 
 osa-m.8   4351878   uncharacterized LOC4351878 
 osa-e.1   4351878   uncharacterized LOC4351878 
 tae-r.2   123189514   tetratricopeptide repeat protein 1 
 tae-r.2   123053619   uncharacterized LOC123053619 
 tae-r.2   123045742   uncharacterized LOC123045742 
 hvu-r.1   123426996   uncharacterized LOC123426996 
 bdi-r.1   100837304   uncharacterized LOC100837304 
 sbi-r.1   8061224   uncharacterized LOC8061224 
 ath-u.5   AT2G01640   ribosome biogenesis protein 
 gma-u.5   100802777   uncharacterized LOC100802777 
 gma-u.5   100527125   uncharacterized LOC100527125 
 sly-u.5   101245739   uncharacterized LOC101245739 
 bra-r.6   103854050   putative ribosome biogenesis protein slx9-like 
 vvi-u.5   100243540   uncharacterized LOC100243540 
 ppo-u.5   7490059   uncharacterized LOC7490059 
 mtr-u.5   25485424   uncharacterized LOC25485424 
 ghi-r.1   107908883   putative ribosome biogenesis protein slx9-like 
 ghi-r.1   107934996   putative ribosome biogenesis protein slx9-like 
 bna-r.1   106432942   putative ribosome biogenesis protein slx9-like 
 bna-r.1   106424274   putative ribosome biogenesis protein slx9-like 
 sot-r.1   102604907   uncharacterized LOC102604907 
 cit-r.1   102610202   uncharacterized LOC102610202 
 nta-r.1   107827565   uncharacterized LOC107827565 
 nta-r.1   107831459   uncharacterized LOC107831459 
 cre-r.1   CHLRE_06g248800v5   uncharacterized protein 

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Top 50 coexpressed genes to 4351878 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4351878 (osa-u.5 coexpression data)

CoexMap"4351878"


osaLOC4351878 | Entrez gene ID : 4351878      
Species osa tae hvu bdi sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre zma
Paralog 4 3 1 1 1 1 2 1 1 1 1 1 2 2 1 1 2 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000462 [list] [network] maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)  (29 genes)  IEA  
GO CC
GO:0030688 [list] [network] preribosome, small subunit precursor  (12 genes)  IEA  
GO:0030686 [list] [network] 90S preribosome  (36 genes)  IEA  
GO:0005730 [list] [network] nucleolus  (202 genes)  IEA  
GO MF
Protein XP_015619778.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_015619778.1)
Subcellular
localization
TargetP
other 8  (predict for XP_015619778.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.5
for
4351878
osa-r.6
for
4351878
osa-m.8
for
4351878
osa-e.1
for
4351878
tae-r.2
for
123189514
tae-r.2
for
123053619
tae-r.2
for
123045742
hvu-r.1
for
123426996
bdi-r.1
for
100837304
sbi-r.1
for
8061224
ath-u.5
for
AT2G01640
gma-u.5
for
100802777
gma-u.5
for
100527125
sly-u.5
for
101245739
bra-r.6
for
103854050
vvi-u.5
for
100243540
ppo-u.5
for
7490059
mtr-u.5
for
25485424
ghi-r.1
for
107908883
ghi-r.1
for
107934996
bna-r.1
for
106432942
bna-r.1
for
106424274
sot-r.1
for
102604907
cit-r.1
for
102610202
nta-r.1
for
107827565
nta-r.1
for
107831459
cre-r.1
for
CHLRE_06g248800v5


Ortholog ID: 7135
Species osa tae tae tae hvu bdi zma sbi ath gma gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC4351878 LOC123189514 LOC123053619 LOC123045742 LOC123426996 LOC100837304 LOC100278920 LOC8061224 AT2G01640 LOC100802777 LOC100527125 LOC101245739 LOC103854050 LOC100243540 LOC7490059 LOC25485424 LOC107908883 LOC107934996 LOC106432942 LOC106424274 LOC102604907 LOC102610202 LOC107827565 LOC107831459 CHLRE_06g248800v5
Function* uncharacterized LOC4351878 tetratricopeptide repeat protein 1 uncharacterized LOC123053619 uncharacterized LOC123045742 uncharacterized LOC123426996 uncharacterized LOC100837304 uncharacterized LOC100278920 uncharacterized LOC8061224 ribosome biogenesis protein uncharacterized LOC100802777 uncharacterized LOC100527125 uncharacterized LOC101245739 putative ribosome biogenesis protein slx9-like uncharacterized LOC100243540 uncharacterized LOC7490059 uncharacterized LOC25485424 putative ribosome biogenesis protein slx9-like putative ribosome biogenesis protein slx9-like putative ribosome biogenesis protein slx9-like putative ribosome biogenesis protein slx9-like uncharacterized LOC102604907 uncharacterized LOC102610202 uncharacterized LOC107827565 uncharacterized LOC107831459 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 11
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 3
tae03010 Ribosome 3
tae00053 Ascorbate and aldarate metabolism 2
tae01240 Biosynthesis of cofactors 2
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
tae03020 RNA polymerase 3
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 5
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
sly03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 4
vvi00260 Glycine, serine and threonine metabolism 2
vvi00270 Cysteine and methionine metabolism 2
vvi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 4
ppo03008 Ribosome biogenesis in eukaryotes 3
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 3
sot03008 Ribosome biogenesis in eukaryotes 2
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00740 Riboflavin metabolism 3
nta01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 5
nta03420 Nucleotide excision repair 5
nta03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 7
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4351878 123189514 123053619 123045742 123426996 100837304 100278920 8061224 814693 100802777 100527125 101245739 103854050 100243540 7490059 25485424 107908883 107934996 106432942 106424274 102604907 102610202 107827565 107831459 5722237
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